PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW02063.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HD-ZIP

Protein Properties

Length: 180aa MW: 20762.8 Da PI: 9.6328

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW02063.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.7	4.7e-19	35	88	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ +++keq + Lee F+++++++ +++e LA+kl+L rqV vWFqNrRa+ k RWW02063.1 35 KKLRLSKEQSRLLEESFRQHHTLNPKQKEALAMKLKLRPRQVEVWFQNRRARTK 88 67789***********************************************98 PP
2	HD-ZIP_I/II	124.5	4.9e-40	35	122	2	90
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 kk+rlskeq++lLEesF+++++L+p++K++la +L+l+prqv+vWFqnrRARtk+kq+E+++e+Lkr++ +l+een+rL++eveeLr + RWW02063.1 35 KKLRLSKEQSRLLEESFRQHHTLNPKQKEALAMKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELR-A 122 9*************************************************************************************9.4 PP

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence
MRDLDINQPA YGGEEEYPMA SIEEEEEEGG NPRPKKLRLS KEQSRLLEES FRQHHTLNPK 60 QKEALAMKLK LRPRQVEVWF QNRRARTKLK QTEMECEYLK RCFGSLTEEN RRLQREVEEL 120 RALRVAPPTV LSPHTRQPLP ASSLTMCPRC ERVTTAATAI PRALIGRPPS ASPFPRSTAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	83	91	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01430.1	3e-62	HD-ZIP family protein