PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW02096.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 157aa MW: 17288.4 Da PI: 6.4876

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW02096.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	63.6	5e-20	4	50	1	47
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllk 47 +CaaC++l rkC ++C lapyfpa+++ kfa vhk+FGasnv+k+l+ RWW02096.1 4 PCAACRTLHRKCDHGCLLAPYFPADESDKFASVHKVFGASNVVKMLR 50 7********************************************96 PP
2	DUF260	44.8	3.6e-14	61	126	36	100
DUF260 36 lFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 l G + ++ + ++ +e +eda++s+vyeA+ar++dPvyG++g++l lq+ +e+l+ +l ++e+ RWW02096.1 61 LLGSTVMMAMAVQVVKEGmKEDAIKSMVYEAHARLQDPVYGCAGIVLCLQRCVEELQGQLRPVHEQ 126 5666667777666655554***************************************99988876 PP

Sequence ? help Back to Top
Protein Sequence Length: 157 aa Download sequence
MDLPCAACRT LHRKCDHGCL LAPYFPADES DKFASVHKVF GASNVVKMLR VRVCPLLVCL 60 LLGSTVMMAM AVQVVKEGMK EDAIKSMVYE AHARLQDPVY GCAGIVLCLQ RCVEELQGQL 120 RPVHEQVLEA QLQRDQLVSA LMGATEVDAL LYAHCSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	2e-35	LBD family protein