PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW02214.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 394aa MW: 43756.6 Da PI: 9.8122

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW02214.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18	8.1e-06	51	73	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C + F r nL+ H r+H RWW02214.1 51 YVCEICQQGFQRDQNLQMHRRRH 73 9*********************9 PP
2	zf-C2H2	15.3	5.7e-05	131	152	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C +C+k + +s++k H++t+ RWW02214.1 131 ACAKCSKAYAVQSDYKAHLKTC 152 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MLSSPPPAPP PPPGGTNGTG NKKKRRPAGT PDPDADVVAL SPRTLLESDR YVCEICQQGF 60 QRDQNLQMHR RRHKVPWKLL KRDAAASEVR KRVFVCPETT CLHHDPRHAL GDLVGIKKHF 120 RRKHSSHRQW ACAKCSKAYA VQSDYKAHLK TCGTRGHSCD CGRMNQAPPC VSRTATNTTP 180 SSWPGLGMPS PAAAVFLTRP GHSPSSQPVR RCTENIELPL LPTSNNQHTT RPSSVLSSPA 240 SEEAEVTKLQ LSLGPADDHT PAKDAQAATA RLKDEVMERL KLAMAEKALA DDARQQARRQ 300 LELAEHEIER ARRIRQQAQL ELNRAHAIRE HAVKQISSAV VQITCHACKQ QFQQAKPAMA 360 FEENSFAISY MSSAVTEGEE ENDDRNHQRK IPKL

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MLSSPPPAPP PPPGGTNGTG NKKKRRPAGT PDPDADVVAL SPRTLLESDR YVCEICQQGF  60
QRDQNLQMHR RRHKVPWKLL KRDAAASEVR KRVFVCPETT CLHHDPRHAL GDLVGIKKHF  120
RRKHSSHRQW ACAKCSKAYA VQSDYKAHLK TCGTRGHSCD CGRMNQAPPC VSRTATNTTP  180
SSWPGLGMPS PAAAVFLTRP GHSPSSQPVR RCTENIELPL LPTSNNQHTT RPSSVLSSPA  240
SEEAEVTKLQ LSLGPADDHT PAKDAQAATA RLKDEVMERL KLAMAEKALA DDARQQARRQ  300
LELAEHEIER ARRIRQQAQL ELNRAHAIRE HAVKQISSAV VQITCHACKQ QFQQAKPAMA  360
FEENSFAISY MSSAVTEGEE ENDDRNHQRK IPKL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	22	26	KKKRR
2	22	27	KKKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01940.1	1e-108	C2H2 family protein