PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW02247.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 295aa MW: 31988.2 Da PI: 7.8535

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW02247.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.9	1.5e-10	14	45	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g+WT+eEd +lv +++++G+g+W+++++ g RWW02247.1 14 KGPWTPEEDIILVSYIQEHGPGNWRAVPANTG 45 79*************************98766 PP
2	Myb_DNA-binding	48.4	2.2e-15	94	139	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E +++++ ++lG++ W++Ia++++ Rt++++k++w+++l RWW02247.1 94 RGNFTDQENRIIIHLQALLGNR-WAAIASYLP-QRTDNDIKNHWNTHL 139 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MSTPTCSEEV GVKKGPWTPE EDIILVSYIQ EHGPGNWRAV PANTGDLGCF IVFIQSSLVQ 60 PLTCSCVLCL PGLMRCSKSC RLRWTNYLRP GIKRGNFTDQ ENRIIIHLQA LLGNRWAAIA 120 SYLPQRTDND IKNHWNTHLK KKVRKVEADG NGPKPSSISR GKWERCLQTD IHKARRALCE 180 ALLIEKPADC ASDDSSRTAY ASSAENISRL LKGRTGNPPG ATGAADLAST TTQADSASSS 240 QGTASTSNSA VARQPSSCQT PFTLLESWLL VEETVAQGPE NLLGMAMDDA GGDLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28910.1	2e-80	MYB family protein