PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW02430.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

GRAS

Protein Properties

Length: 1041aa MW: 113808 Da PI: 7.0274

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW02430.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	433.2	1.9e-132	238	621	1	373
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 lv++L++cAeav++++l++a+al++++ l +++g +m+++a yf+eALa+ ++r ++ + + +s+ ++ ++ l+ f+e sP+lkf+h+taN RWW02430.1 238 LVHALMACAEAVQQESLKAADALVKQITVLTTSQGGAMRKVAGYFAEALARCIYR--PQPHRGVGCSSRDSAAFDNILHL--HFYESSPYLKFAHFTAN 332 689**************************************************..55555666666653333333333..4************ PP GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL.... 194 qaIlea++g++rvH++Df++ qGlQWpaLlqaLa Rp+gpps+R+Tg+g+p+++++++l+e+g++La++A++++++f+++ lva +l+dle+ +L RWW02430.1 333 QAILEAFAGCRRVHVVDFGMRQGLQWPALLQALALRPGGPPSFRLTGIGPPQPDHSDALQEVGWKLAQLADTIRIDFRYRGLVAASLADLEPYMLlgpn 431 *******************************************************************************************8888 PP GRAS 195 ..rvkp......gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres...... 279 ++++ Ea+aVn+v++lh ll+++++le+ vL +v+ ++P++v+vveqea+hn+++F+erf+eal+yys++fdsle ++++++ RWW02430.1 432 tgDCSEggedeeAEAVAVNSVFELHGLLSRPGALEK----VLGTVRAVQPRIVTVVEQEANHNGGTFMERFTEALHYYSTMFDSLEGGASAAEaacggg 526 8855556666679*****************99....*****************************************88766655568988 PP GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaW 373 + ++ +++++lgr+i+nvv+ceg er+erhe l++Wr r+++aGF pv+++++a kqa++ll+ ++ +dgyrvee++g+l+lgW++rpL+++SaW RWW02430.1 527 RRDQALSEVYLGRQICNVVSCEGVERTERHEALAQWRVRMGRAGFDPVAIGSNAFKQASMLLALFAgGDGYRVEEKEGCLTLGWHTRPLIATSAW 621 9999***************************************************************************************** PP

Sequence ? help Back to Top
Protein Sequence Length: 1041 aa Download sequence
MKREHQDAVD GGGSCYPEAA EMEHEKGKGT MGAEEDGGGV DELLAALGYK VRSSDMADVA 60 QKLEQLEKAM GSSTAANDDA LFSHLASDTV HYNPSDLSTW VDNILSELNA PPTPLAPPPE 120 SPPPPAVPLH NRHHQRRFDL PLAAPEQSTI TTVDLPAAPR RPADNYDLKP LPAPHADAAG 180 RIVYGSDTQS VVAPSPRDRK RMKVCSSPPS SSSTTDAAKS DRALPVVVVD TQEAGIRLVH 240 ALMACAEAVQ QESLKAADAL VKQITVLTTS QGGAMRKVAG YFAEALARCI YRPQPHRGVG 300 CSSRDSAAFD NILHLHFYES SPYLKFAHFT ANQAILEAFA GCRRVHVVDF GMRQGLQWPA 360 LLQALALRPG GPPSFRLTGI GPPQPDHSDA LQEVGWKLAQ LADTIRIDFR YRGLVAASLA 420 DLEPYMLLGP NTGDCSEGGE DEEAEAVAVN SVFELHGLLS RPGALEKVLG TVRAVQPRIV 480 TVVEQEANHN GGTFMERFTE ALHYYSTMFD SLEGGASAAE AACGGGRRDQ ALSEVYLGRQ 540 ICNVVSCEGV ERTERHEALA QWRVRMGRAG FDPVAIGSNA FKQASMLLAL FAGGDGYRVE 600 EKEGCLTLGW HTRPLIATSA WLSLVFSSPS LRLQYWSHVR FSASPLLPYS SFPPLSGPSP 660 RLPSTDAPPS HHHHHHHHHH HHHRDNDGDD RLAPLALRHI VFGIGGSAHL WQRRREFVRL 720 WWRPGAMRGH VWLDDRVPRA PRNSSLARSL PPVRVSEDIS RFRYTNPTGN PSGLRIARIL 780 AETVRIGHRG ARWFVLVDDD TIICPENLVA VLAKYDWTEM VYVGAPSESH SANTYFSHSM 840 AFGGGGIAIS NPLAEALAGM MDECIERYPR LYGSDDRLHA CVSELGVPLT RDAHGLLAAH 900 PVAPFISIHH VEAVDPLYPG LSSLQSLKLF TKAMKSDPLS FLQRSICYDK RKKLTFSISL 960 GYAIQVFPSI VLPRELDRSE RTYAAWNKLN SRNEFDIDTR DAYRSVPRRL CCKLSQRHNG 1020 TLGIAVGQCE RGASGSAADS L

Sequence ? help Back to Top

Protein Sequence Length: 1041 aa Download sequence

MKREHQDAVD GGGSCYPEAA EMEHEKGKGT MGAEEDGGGV DELLAALGYK VRSSDMADVA  60
QKLEQLEKAM GSSTAANDDA LFSHLASDTV HYNPSDLSTW VDNILSELNA PPTPLAPPPE  120
SPPPPAVPLH NRHHQRRFDL PLAAPEQSTI TTVDLPAAPR RPADNYDLKP LPAPHADAAG  180
RIVYGSDTQS VVAPSPRDRK RMKVCSSPPS SSSTTDAAKS DRALPVVVVD TQEAGIRLVH  240
ALMACAEAVQ QESLKAADAL VKQITVLTTS QGGAMRKVAG YFAEALARCI YRPQPHRGVG  300
CSSRDSAAFD NILHLHFYES SPYLKFAHFT ANQAILEAFA GCRRVHVVDF GMRQGLQWPA  360
LLQALALRPG GPPSFRLTGI GPPQPDHSDA LQEVGWKLAQ LADTIRIDFR YRGLVAASLA  420
DLEPYMLLGP NTGDCSEGGE DEEAEAVAVN SVFELHGLLS RPGALEKVLG TVRAVQPRIV  480
TVVEQEANHN GGTFMERFTE ALHYYSTMFD SLEGGASAAE AACGGGRRDQ ALSEVYLGRQ  540
ICNVVSCEGV ERTERHEALA QWRVRMGRAG FDPVAIGSNA FKQASMLLAL FAGGDGYRVE  600
EKEGCLTLGW HTRPLIATSA WLSLVFSSPS LRLQYWSHVR FSASPLLPYS SFPPLSGPSP  660
RLPSTDAPPS HHHHHHHHHH HHHRDNDGDD RLAPLALRHI VFGIGGSAHL WQRRREFVRL  720
WWRPGAMRGH VWLDDRVPRA PRNSSLARSL PPVRVSEDIS RFRYTNPTGN PSGLRIARIL  780
AETVRIGHRG ARWFVLVDDD TIICPENLVA VLAKYDWTEM VYVGAPSESH SANTYFSHSM  840
AFGGGGIAIS NPLAEALAGM MDECIERYPR LYGSDDRLHA CVSELGVPLT RDAHGLLAAH  900
PVAPFISIHH VEAVDPLYPG LSSLQSLKLF TKAMKSDPLS FLQRSICYDK RKKLTFSISL  960
GYAIQVFPSI VLPRELDRSE RTYAAWNKLN SRNEFDIDTR DAYRSVPRRL CCKLSQRHNG  1020
TLGIAVGQCE RGASGSAADS L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01570.1	1e-180	GRAS family protein