PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW02431.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 705aa MW: 76754.8 Da PI: 6.6444

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW02431.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	96.4	2.7e-30	79	163	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r+em+ ++r++ k+plWee+s+k++e g+ers+k+Ckek+en++k+yk+ k+g+ +r ++ +t++++++lea RWW02431.1 79 RWPRQETLALLKIRSEMDAAFRDATFKGPLWEEISRKLAELGYERSAKKCKEKFENVHKYYKRKKDGRAGR--QDGKTYRFYTELEA 163 8******************************************************************98..56667****985 PP
2	trihelix	109.2	2.7e-34	441	526	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r+++e+r++++ k+plWee+s m++ g++rs+k+Ckekwen+nk++kk+ke+++kr +e+s+tcpyf+qlea RWW02431.1 441 RWPKAEVHALIDLRSSLESRYQDSGPKGPLWEEISTGMQRLGYNRSAKRCKEKWENINKYFKKVKESNRKR-PEDSKTCPYFHQLEA 526 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 705 aa Download sequence
MQQQEGGSQF GAPSTETAGH RAGAFLQPPL LLAEAASPIS SRPPPPEDAA ADFDEMGPTV 60 AGGTFPDEEA ERGGAPGNRW PRQETLALLK IRSEMDAAFR DATFKGPLWE EISRKLAELG 120 YERSAKKCKE KFENVHKYYK RKKDGRAGRQ DGKTYRFYTE LEALHSIGRG GATTPSAIAA 180 PHLPAASSSP FSFTTGMEGP SGTRIQVSPI SGGAPPPVTM PASAVPEHGA RGVSSPAAAA 240 AAAGLGFSSN SSSSSSSESD DEDTEEAGGV GKGRKRKHRG RARYRRQMMS FFEGLMKQVM 300 ERQEAIQQRF LDAIEKREQD RMKREEAWRL QEISRLSREQ ELLVQERAMA ASRDSAVVSY 360 LQKISGQSIP LPATPAAASC IAPHPPQPPH TLPPPTLPQQ AQPPQQKRDA QQSSATQMAP 420 INSEAQEGQG SGSFEPTSSS RWPKAEVHAL IDLRSSLESR YQDSGPKGPL WEEISTGMQR 480 LGYNRSAKRC KEKWENINKY FKKVKESNRK RPEDSKTCPY FHQLEALCRK KLLGSSGGGT 540 SSSSVGVKPQ QEPISQEQHQ QWPPTKTPGD NGNDNVNSNG GNAEAGEGRD GAQVQTSKGG 600 HRPTYFEEGK SLRHPKPEDT VKELMEQRQR QPMMDDPDKM DEPDSNNLHE DEGDDDDNED 660 DEDSKMQYEI QFQRQSVRGG GGGNASTTAS AAATTAAGSF LAVVQ

Sequence ? help Back to Top

Protein Sequence Length: 705 aa Download sequence

MQQQEGGSQF GAPSTETAGH RAGAFLQPPL LLAEAASPIS SRPPPPEDAA ADFDEMGPTV  60
AGGTFPDEEA ERGGAPGNRW PRQETLALLK IRSEMDAAFR DATFKGPLWE EISRKLAELG  120
YERSAKKCKE KFENVHKYYK RKKDGRAGRQ DGKTYRFYTE LEALHSIGRG GATTPSAIAA  180
PHLPAASSSP FSFTTGMEGP SGTRIQVSPI SGGAPPPVTM PASAVPEHGA RGVSSPAAAA  240
AAAGLGFSSN SSSSSSSESD DEDTEEAGGV GKGRKRKHRG RARYRRQMMS FFEGLMKQVM  300
ERQEAIQQRF LDAIEKREQD RMKREEAWRL QEISRLSREQ ELLVQERAMA ASRDSAVVSY  360
LQKISGQSIP LPATPAAASC IAPHPPQPPH TLPPPTLPQQ AQPPQQKRDA QQSSATQMAP  420
INSEAQEGQG SGSFEPTSSS RWPKAEVHAL IDLRSSLESR YQDSGPKGPL WEEISTGMQR  480
LGYNRSAKRC KEKWENINKY FKKVKESNRK RPEDSKTCPY FHQLEALCRK KLLGSSGGGT  540
SSSSVGVKPQ QEPISQEQHQ QWPPTKTPGD NGNDNVNSNG GNAEAGEGRD GAQVQTSKGG  600
HRPTYFEEGK SLRHPKPEDT VKELMEQRQR QPMMDDPDKM DEPDSNNLHE DEGDDDDNED  660
DEDSKMQYEI QFQRQSVRGG GGGNASTTAS AAATTAAGSF LAVVQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	280	288	GRARYRRQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	2e-75	Trihelix family protein