PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW02454.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 593aa MW: 65325.1 Da PI: 7.1098

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW02454.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.9	3.2e-12	448	493	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +L RWW02454.1 448 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAISYITEL 493 799*********************66......*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 593 aa Download sequence
MGRGSFWSDD DRHMAVAVLG HQAFHFLSSR HESSSDSRLT AVGCGDAGLQ NKLQDLVEGR 60 RSASSSSSSS SSWAYAIFWQ ISRSESGDLV LGWGDGHCRE LEDAEEVDGG SRNHPLEAAR 120 QQMRKRVLER LHALSGGSDD ENYALQLDRI TDSEMYFLAS MYFSFPKGED APGRALASGK 180 HIWISQAALA SPACANHCVR AFLARSAGFR TIVFVPFDAG VLELGSVEPV PESFETLHKI 240 GSVFCQGRNK AAAVGEKLGE NNSHVSASRF APSSHIPAEY AKIFGNDLSL GHAELNGRAT 300 STVKANKPPL EVMARHGDHL KANPLGDAAT LLEWNQNHNV NSHQQKFGNG VAYVRHVNGV 360 VRDDRPRTNP FQPQQQQRQQ PLSQSGQIDF RAGAADPGVV VSRLGAAFDS ELSDVEAPCK 420 QDTPGTTEDR RPRKRGRKPA NGREEPLNHV EAERQRREKL NQRFYALRAV VPNISKMDKA 480 SLLGDAISYI TELHKKLKEM EAEREMWGDP CLMDYKRRSQ CPEIDVQVAQ GEVIVRVTCP 540 LESHPLSEVM QAFKNSQINV ADSSVTASND SVLHTFVVKS PVAEQLTKEK LMR

Sequence ? help Back to Top

Protein Sequence Length: 593 aa Download sequence

MGRGSFWSDD DRHMAVAVLG HQAFHFLSSR HESSSDSRLT AVGCGDAGLQ NKLQDLVEGR  60
RSASSSSSSS SSWAYAIFWQ ISRSESGDLV LGWGDGHCRE LEDAEEVDGG SRNHPLEAAR  120
QQMRKRVLER LHALSGGSDD ENYALQLDRI TDSEMYFLAS MYFSFPKGED APGRALASGK  180
HIWISQAALA SPACANHCVR AFLARSAGFR TIVFVPFDAG VLELGSVEPV PESFETLHKI  240
GSVFCQGRNK AAAVGEKLGE NNSHVSASRF APSSHIPAEY AKIFGNDLSL GHAELNGRAT  300
STVKANKPPL EVMARHGDHL KANPLGDAAT LLEWNQNHNV NSHQQKFGNG VAYVRHVNGV  360
VRDDRPRTNP FQPQQQQRQQ PLSQSGQIDF RAGAADPGVV VSRLGAAFDS ELSDVEAPCK  420
QDTPGTTEDR RPRKRGRKPA NGREEPLNHV EAERQRREKL NQRFYALRAV VPNISKMDKA  480
SLLGDAISYI TELHKKLKEM EAEREMWGDP CLMDYKRRSQ CPEIDVQVAQ GEVIVRVTCP  540
LESHPLSEVM QAFKNSQINV ADSSVTASND SVLHTFVVKS PVAEQLTKEK LMR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	430	438	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	7e-62	bHLH family protein