PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW02535.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 248aa    MW: 26932.5 Da    PI: 9.3151
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW02535.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH44.13.4e-14109135127
                 --S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                 +kt+lC+ f++tG C+yGd+C+FaHgp
  RWW02535.1 109 FKTRLCQKFRATGSCPYGDSCSFAHGP 135
                 79***********************96 PP
2zf-CCCH25.13.1e-08153175426
                 ---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                 ++Cr f+++  C+yG++C +aH+
  RWW02535.1 153 KICRKFYAGEVCPYGEKCLYAHV 175
                 68******66************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MEFPTSIPPP VSSVPSLGLD AIVLWPPSTP HLPPPPPNEQ QGFMAPPPPK RPRLLLHPPQ  60
EEEEAASPMM IASTRLPAAF VPNMPPASFS TMRPPRPPPP TTAPNQVLFK TRLCQKFRAT  120
GSCPYGDSCS FAHGPEDLRQ PPPNWQEITR TQKICRKFYA GEVCPYGEKC LYAHVRRDGS  180
VVAPADRLHP SQISGGLGSA GGSHASNRSI PRSSNSKPLY NRENTGTHTN EERRISAHDS  240
SGKTSGTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19360.19e-18C3H family protein