PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW02749.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family ARF
Protein Properties Length: 256aa    MW: 28921.2 Da    PI: 9.4133
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW02749.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B369.64.1e-2272173199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+k+lt sd++++g +++p++ ae++       + +++  ++++ +d++ + W++++i+r++++r++lt+GW+ Fv+ ++L +gD+v+F   ++++++l
  RWW02749.1  72 FCKTLTASDTSTHGGFSVPRRAAEKMfpaldfsM-QPPA-QEIQARDLHENLWTFRHIFRGQPKRHLLTTGWSLFVSGKKLFSGDSVLFI--RNEKQQL 166
                 99*****************************954.4444.48************************************************..5688999 PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +++++r 
  RWW02749.1 167 LLGIRRV 173
                 **99985 PP
2Auxin_resp71.91.9e-24198256158
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserr 58 
                 aahaa+++s+F+v+YnPra++s+Fv++++k++ka++ +++ +GmRf+m fete+s +rr
  RWW02749.1 198 AAHAAANNSPFTVFYNPRACPSQFVIPFAKYQKAVYsNQIFLGMRFRMLFETEESGTRR 256
                 79*********************************9899***************99886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MQKDLDAHIP NYTSLPSKLI CLLHNVTLHV DAETDEVYAQ MTLQPVNSVY DKEALLASEL  60
ALQQTRPLTE FFCKTLTASD TSTHGGFSVP RRAAEKMFPA LDFSMQPPAQ EIQARDLHEN  120
LWTFRHIFRG QPKRHLLTTG WSLFVSGKKL FSGDSVLFIR NEKQQLLLGI RRVNRQPISI  180
SSSVLSSDSM HIGVLAAAAH AAANNSPFTV FYNPRACPSQ FVIPFAKYQK AVYSNQIFLG  240
MRFRMLFETE ESGTRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.11e-116ARF family protein