PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW02858.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 275aa MW: 30806.7 Da PI: 8.7165

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW02858.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51	3.3e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd+ll d++ +G g+W++ ++ g++R++k+c++rw++yl RWW02858.1 14 RGAWTSEEDKLLSDYIFAHGLGRWRSLPANAGLNRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	55.8	1.1e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+ T+eE++l+++++++lG++ W++Ia +++ gRt++++k++w++yl RWW02858.1 67 KGNITQEEEDLIIRLHNLLGNR-WSLIAGRLP-GRTDNEIKNYWNTYL 112 6899****************.*****.***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MRKASCCPKE GLNRGAWTSE EDKLLSDYIF AHGLGRWRSL PANAGLNRCG KSCRLRWLNY 60 LRPDIKKGNI TQEEEDLIIR LHNLLGNRWS LIAGRLPGRT DNEIKNYWNT YLRKKGLHSS 120 PSPASKNREV QTVQTVTDKQ KGVEVNVIRT KAIRCTKSLF ADEVPARGMN NSAYSVLPSA 180 IFDYDTSGFS GHDPAPQAAK RVCSEGNMQN SVFSQAADGF YTSSGSFHHD SFSATASSSY 240 FNYTKICSNV LEKGEELHPF MCDDEWVSLL MPPNI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	8e-65	MYB family protein