PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW02947.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 403aa MW: 45845.6 Da PI: 4.4636

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW02947.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	47.1	6.3e-15	141	225	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W+++ + +L++a ++ ++ +r++l+ W ev+kk+ ++ ++ rs qC+++ + l+k+ykk+k++ + ++ s++++f++++ RWW02947.1 141 WSEDSTFVLLDAWGDRYRQNGRKSLRSDEWNEVAKKVsQASKVVRSDAQCRNRVDTLKKKYKKEKASIMAHG-NAGSKWVFFKKMD 225 ***********************************788999**********************995.55569*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MDDSEDDARY PPNLHPTKPR HYFPSSSSSA PRPKTRFRNP LPPPHFSRGY DDASDDDEED 60 EADEEEQNYM DQPVDDDEDD DGDGHRRTRN YRDDDDDDGS SSESRGKRRR IDKLALGFEF 120 APRLRAAAPP KPLARTSPPD WSEDSTFVLL DAWGDRYRQN GRKSLRSDEW NEVAKKVSQA 180 SKVVRSDAQC RNRVDTLKKK YKKEKASIMA HGNAGSKWVF FKKMDSLMSS PSPPPLTARQ 240 QPPPPPPPRL PCGVDAGEYV FASSSVYRNG YSGNNEMRDS PGDSGTEGDG GEENDSDGLP 300 PQRENICSDS SFKMLAESIQ KFGEVYEKME NHKRQQMAEL ERMRKEFQRD LEVQKRQILE 360 RVQEEIAKLR EEQVEEDDDE DLEDRDEDNN DGDDGGSAEN LSG

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MDDSEDDARY PPNLHPTKPR HYFPSSSSSA PRPKTRFRNP LPPPHFSRGY DDASDDDEED  60
EADEEEQNYM DQPVDDDEDD DGDGHRRTRN YRDDDDDDGS SSESRGKRRR IDKLALGFEF  120
APRLRAAAPP KPLARTSPPD WSEDSTFVLL DAWGDRYRQN GRKSLRSDEW NEVAKKVSQA  180
SKVVRSDAQC RNRVDTLKKK YKKEKASIMA HGNAGSKWVF FKKMDSLMSS PSPPPLTARQ  240
QPPPPPPPRL PCGVDAGEYV FASSSVYRNG YSGNNEMRDS PGDSGTEGDG GEENDSDGLP  300
PQRENICSDS SFKMLAESIQ KFGEVYEKME NHKRQQMAEL ERMRKEFQRD LEVQKRQILE  360
RVQEEIAKLR EEQVEEDDDE DLEDRDEDNN DGDDGGSAEN LSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	107	111	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	2e-52	Trihelix family protein