PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW03466.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TCP

Protein Properties

Length: 357aa MW: 37326.1 Da PI: 6.4113

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW03466.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	115.4	7.3e-36	63	146	6	88
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg 88 +r++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a ++ +++ + +++++s+ RWW03466.1 63 SRTKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIKWLLEHAEPAIIAATGTGTVPAIAThVDGTLKIPTEAPTSA 146 69**********************************************************888884442222222222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
METQKRDGED WQRKTTGGSG RSLSGVAVPS TGTIPVHRFI VPKPEPIEML GVGAFQILRR 60 PASRTKDRHT KVEGRGRRIR MPAACAARIF QLTRELGHKS DGETIKWLLE HAEPAIIAAT 120 GTGTVPAIAT HVDGTLKIPT EAPTSAPVSS TSTIVAPDDA PATDDDEAGK KRRKKLQPSR 180 TGGGTVIAGY YPVQDPLLPV GGAISISSGL APIGSGAQGM MPMWTLGGDA AGANMIPPGA 240 LWVLPPPSVA VAPSGQSQIW TFPRAPQIIN LTAVRPVSTE TRFTTTASGV VAAKAAAEVQ 300 HSAAPPVAAA YAPASGGKQE LQLMSNPGAL RRRQVHELDA SEDDEDDDDD DDSSAED

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

METQKRDGED WQRKTTGGSG RSLSGVAVPS TGTIPVHRFI VPKPEPIEML GVGAFQILRR  60
PASRTKDRHT KVEGRGRRIR MPAACAARIF QLTRELGHKS DGETIKWLLE HAEPAIIAAT  120
GTGTVPAIAT HVDGTLKIPT EAPTSAPVSS TSTIVAPDDA PATDDDEAGK KRRKKLQPSR  180
TGGGTVIAGY YPVQDPLLPV GGAISISSGL APIGSGAQGM MPMWTLGGDA AGANMIPPGA  240
LWVLPPPSVA VAPSGQSQIW TFPRAPQIIN LTAVRPVSTE TRFTTTASGV VAAKAAAEVQ  300
HSAAPPVAAA YAPASGGKQE LQLMSNPGAL RRRQVHELDA SEDDEDDDDD DDSSAED

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	170	174	KKRRK
2	170	175	KKRRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	1e-44	TCP family protein