PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW03650.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 190aa MW: 21557.1 Da PI: 7.9688

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW03650.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.9	2e-07	22	66	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 +WT eEd+ + +a ++ g +W++Ia+ + R++ + + r+q RWW03650.1 22 PWTREEDKVFERALVAYPEGtagRWSAIAAQLV-ERSPVEARGRYQ 66 8******************************.9999888887 PP
2	Myb_DNA-binding	46.9	6.2e-15	124	168	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++++ +++G+g+W+ I+r k+Rt+ q+ s+ qk+ RWW03650.1 124 PWTEEEHRLFLEGLAKYGKGDWRNISRWAVKTRTPTQVASHAQKF 168 8******************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MGEREVMSVF SGQFVAAAAA RPWTREEDKV FERALVAYPE GTAGRWSAIA AQLVERSPVE 60 ARGRYQALVE DCHMIEQGMV EVPDCWGEAD EGANCGDESE GGCPRQRQPP ITRGKAEERR 120 RGVPWTEEEH RLFLEGLAKY GKGDWRNISR WAVKTRTPTQ VASHAQKFFI RQNQNNGRET 180 KRKSIHDITK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	6e-50	MYB family protein