PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW03872.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family HD-ZIP
Protein Properties Length: 287aa    MW: 32514.7 Da    PI: 8.5796
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW03872.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.74.2e-181974354
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHH CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRak 54
                k  ++t+eq+e+Le+l++ +++ps  +r++L +++    +++ +q+kvWFqNrR++
  RWW03872.1 19 KYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECpilsNIEPKQIKVWFQNRRYR 74
                5679**************************************************98 PP
2bZIP_120.41.1e-06941361961
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  19 rsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                 r+R++ ++e ++L++   +L+a Nk L +e+++l+k+v++l  
  RWW03872.1  94 RCREKQRKEAARLQTVNRKLTAMNKLLMEENDRLQKQVSQLVY 136
                 9**************************************9965 PP
3START25.23.4e-09215277263
                 HHHHHHHHHHHHHHHC-TT-EEEE.EXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHH CS
       START   2 laeeaaqelvkkalaeepgWvkss.esengdevlqkfeeskvdsgealrasgvvdmvlallve 63 
                 +aee+++e+++ka+ ++  Wv+++  +++g++++ +++ s++++g a+ra+g+v  +++++ +
  RWW03872.1 215 IAEETLTEFLSKATGTAIEWVQMPgMKQPGPDSIGIVAISHGCTGVAARACGLVGLEPTKVCS 277
                 789*********************88889*************************999987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MIALTSCEEG KMGIVDQGKY VRYTPEQVEA LERLYHDCPK PSSIRRQQLI RECPILSNIE  60
PKQIKVWFQN RRYRCFPAYN FLLLILHVLS FPIRCREKQR KEAARLQTVN RKLTAMNKLL  120
MEENDRLQKQ VSQLVYENGY FRQQTQNAAL TTTNTSCESV VTNGQQHLTP QHPPRDASPA  180
GYAKYCCSLW YAICLFRFFM AASNKVHCAC RLMSIAEETL TEFLSKATGT AIEWVQMPGM  240
KQPGPDSIGI VAISHGCTGV AARACGLVGL EPTKVCSHWE LTDSACV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.31e-116HD-ZIP family protein