PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW03875.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 297aa MW: 33394.1 Da PI: 7.6679

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW03875.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.2	1.4e-16	34	81	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEde l++ v++ G g+W+t +++ g+ R++k+c++rw +yl RWW03875.1 34 RGPWTAEEDEVLARFVRREGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 81 89****************************99**********97 PP
2	Myb_DNA-binding	52.8	9.1e-17	87	132	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l RWW03875.1 87 RGPITPDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 132 8999****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MRSPSQPSDA MEVQRRPGGP TRTASPCSKV GIKRGPWTAE EDEVLARFVR REGEGRWRTL 60 PKRAGLLRCG KSCRLRWMNY LRPSVKRGPI TPDEEDLILR LHRLLGNRWS LIAGRIPGRT 120 DNEIKNYWNT HLSRKLIKQG IDPRTHKPFT PPTAPAPAAP STARHPTENP NTTPCVPQEP 180 GNGVLYGSDL HHHDGDGWQT SEAFASEGNR ALHFSREEGR RVADDVFSDL LDSFVNDDIF 240 MQHQHMNNND GNKDADNTTI TTTNNNNNSD MIDPTGTSSV PYFALEGLWE DAFTYFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	6e-74	MYB family protein