PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW03927.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 275aa MW: 31663.8 Da PI: 4.8998

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW03927.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.1	4.2e-08	14	45	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g+WT eEd++l++ +G +W+++++ g RWW03927.1 14 KGPWTSEEDKKLINFMLTHGQCCWRAVPKLAG 45 79***************************988 PP
2	Myb_DNA-binding	46.5	8.2e-15	72	115	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g +++E++l ++++ qlG++ W++Ia+ ++ gRt++++k+ w++y RWW03927.1 72 GMLSEDEEKLVIELHSQLGNR-WSKIASQLP-GRTDNEIKNIWNSY 115 55699**************.*****.*********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MGRKPCCEKV GLKKGPWTSE EDKKLINFML THGQCCWRAV PKLAGLLHFC FYMRKRINVW 60 WTNYLRPDLR RGMLSEDEEK LVIELHSQLG NRWSKIASQL PGRTDNEIKN IWNSYIMKKL 120 RKMGIDPLTH KPISPSTEEQ QRRCMDMSCD GDEQAELDCS MDSSETAEEE AKEKNTASPR 180 DPAADASLSN CPEFCTDEVP MLQPHEILIP CDSSAFSSSC SSASSSSSSS PRMEPPEPMH 240 LWGWDDPTGW NPIDQELTWK SYQEDWKYDV FCFDY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16600.1	2e-72	MYB family protein