PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW03935.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 365aa MW: 40542.6 Da PI: 4.7521

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW03935.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.3	6.2e-17	37	84	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEde l+ v++ G g+W+t +++ g++R++k+c++rw +yl RWW03935.1 37 RGPWTPEEDEVLASFVRREGEGRWRTLPKRAGLRRCGKSCRLRWMNYL 84 89********************************************97 PP
2	Myb_DNA-binding	39.6	1.2e-12	95	154	6	48
HHHHHHHHHHHHHTTTT..................-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGgg..................tWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l RWW03935.1 95 PDEEDLILRLHRLLGNRlldtiapfdlfffgisslGWSLIAGRIP-GRTDNEIKNYWNTHL 154 89*****************************************.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MRNPSQSSAP GSSSTAAVEG MRRGGPTPCC SKVGLKRGPW TPEEDEVLAS FVRREGEGRW 60 RTLPKRAGLR RCGKSCRLRW MNYLRPSIKH GPIAPDEEDL ILRLHRLLGN RLLDTIAPFD 120 LFFFGISSLG WSLIAGRIPG RTDNEIKNYW NTHLSKKLIS QGIDPRTHKP LASSTPDAIQ 180 QPLAPPSYAN PNPSRVLNID PSVLHEEGTH HRGIIVQDNE RSFSDRENLQ HDDDDDDEGW 240 QNNELLDGAI GNQEGGDYGT SEDGGIGIDC YTDDIFSSFL DSLINEDAFQ QQQNVSNNED 300 NLILDNTINN NNSSNGNNQE MQPARTSTAP SGPVCGFETF WEADFVAQIG LEEDVHEQFA 360 HHTGK

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MRNPSQSSAP GSSSTAAVEG MRRGGPTPCC SKVGLKRGPW TPEEDEVLAS FVRREGEGRW  60
RTLPKRAGLR RCGKSCRLRW MNYLRPSIKH GPIAPDEEDL ILRLHRLLGN RLLDTIAPFD  120
LFFFGISSLG WSLIAGRIPG RTDNEIKNYW NTHLSKKLIS QGIDPRTHKP LASSTPDAIQ  180
QPLAPPSYAN PNPSRVLNID PSVLHEEGTH HRGIIVQDNE RSFSDRENLQ HDDDDDDEGW  240
QNNELLDGAI GNQEGGDYGT SEDGGIGIDC YTDDIFSSFL DSLINEDAFQ QQQNVSNNED  300
NLILDNTINN NNSSNGNNQE MQPARTSTAP SGPVCGFETF WEADFVAQIG LEEDVHEQFA  360
HHTGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	1e-64	MYB family protein