PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW04013.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 167aa    MW: 19096.3 Da    PI: 10.4173
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW04013.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF71.48.1e-23953145
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                kr en+s rqvt+skR++gilKKA+ELS+LCd++  +++f+++gk
  RWW04013.1  9 KRLENSSSRQVTYSKRKAGILKKAKELSILCDIDLVLLMFAPNGK 53
                789****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MGRVKLKIKR LENSSSRQVT YSKRKAGILK KAKELSILCD IDLVLLMFAP NGKPTICVGD  60
RRKLESLEVS ALRKTFKKLD HDVNIQEFLG SSTQTVEELT NHLRSLHGQI LDVQKRLRYA  120
IHVNKDKIVD EVLRKIKRST NKQESFSSGL YVAVYDYETV VASFALF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18750.11e-44M-type_MADS family protein