PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW04088.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

NAC

Protein Properties

Length: 310aa MW: 35227.2 Da PI: 9.4941

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW04088.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	127.9	7.7e-40	2	107	35	128
NAM 35 kevdiykvePwdLpk............kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdW 121 evd++k+ePwdLp k++ +ekewyfF++rd+ky+tg r+nrat++gyWkatgkdke+++ + elvg+kktLvfy+grapkg kt+W RWW04088.1 2 GEVDLNKCEPWDLPVvkhlirfdvataKARMGEKEWYFFCQRDRKYPTGMRTNRATEAGYWKATGKDKEIHKGRVELVGMKKTLVFYRGRAPKGLKTNW 100 589*********55799999998776666999**********************************9999******************* PP NAM 122 vmheyrl 128 vmhe+rl RWW04088.1 101 VMHEFRL 107 ***98 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MGEVDLNKCE PWDLPVVKHL IRFDVATAKA RMGEKEWYFF CQRDRKYPTG MRTNRATEAG 60 YWKATGKDKE IHKGRVELVG MKKTLVFYRG RAPKGLKTNW VMHEFRLDGK SPFPNIPKSA 120 KDEWAVCKVF HKKMETKSRI PPPESQGVNS LAEDFFDSAT TLPPLVDPPY LNTNAVPSFS 180 AMMGMEHEQA MNHRVISNPP HKSTSRPQLL PQSSYFHQQE AMVRVISNPP HKSTSRPQLL 240 PQSSYFHQQE AMVRAFAAVN DASSACPSQD TDLRTDRTTE ISSMVSARFV DFVHPSSGPA 300 MDLESIWDLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.2	2e-79	NAC family protein