PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW04100.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

GRAS

Protein Properties

Length: 571aa MW: 61623.8 Da PI: 4.6373

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW04100.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	322.8	7.2e-99	236	571	2	330
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn........sseelaalklfsevsPilk 92 e Ll+cA+ ++++d la + L +++e+as++gdp++R+a+yfteAL +rl++++ + + ++ +++++ ++ + +k++++++P+ k RWW04100.1 236 LESLLDCAQ-IADSDPDLAAKSLIHVRETASESGDPTERVAFYFTEALYRRLHGTQRKQHSYPSTAAAPPSCssssfdssPEDFTLCYKALNDACPYSK 333 5789**9.8888**********************************99444333222222222222233455556667777899***** PP GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188 f+hltaNqaIlea+e++er+Hi+Df+i+qG+QW+aLlqaLa+Rp g+p ++Ri g+ +p+ g + +l +tg+rL++fA+ l+++fef++ + + +++ RWW04100.1 334 FAHLTANQAILEATESAERIHIVDFGIMQGVQWAALLQALATRPTGKPsRVRISGIPAPALGaaPAASLVATGNRLRDFAALLDLDFEFDP-ILTPMSE 431 ****************************************666659*****999999**********************.799 PP GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEr 287 l+ ++rv+p+E+l Vn++lql +ll ++++++ ++vL++ ksl P+vv++ e ea++n++ Flerf al yy+a+fdsl+ + r+s er+ vEr RWW04100.1 432 LSAATFRVDPEESLTVNFMLQLCHLL---GDSPEPVERVLRVAKSLGPRVVTLGEYEASLNRAAFLERFRTALAYYAAVFDSLDPAMQRDSAERARVER 527 **********************...555556669********************************************************* PP GRAS 288 ellgreivnvvacegae.rrerhetlekWrerleeaGFkpvpls 330 l+gr+i vv ++ rrer+e e+Wr+ +e++GF++vpls RWW04100.1 528 LLFGRRILGVVGPGDEQiRRERMEANEEWRAVMERCGFETVPLS 571 ********998888**********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MAIAQQVIQQ KQQQQQRQQQ QQQQQLVAAS VNPFSTNPPP WGSSHQPQQH MTDHFPFVIP 60 DPATTFADPF APDPGFAAPP GGGHLDHGPF RLSGFGSAAS AVAAEFDSDE WMESLIGDSP 120 AESSDLMSDP WQGAAGGSGA LFADAFPSCS TDFSPPSPPA SASDLNHVLF SEHCEIAPLA 180 QVQHLHQAAA VVALNPHGPT AQTPSFDPPE LNKNSGGTAV VRDQAPESST SSQPLLESLL 240 DCAQIADSDP DLAAKSLIHV RETASESGDP TERVAFYFTE ALYRRLHGTQ RKQHSYPSTA 300 AAPPSCSSSS FDSSPEDFTL CYKALNDACP YSKFAHLTAN QAILEATESA ERIHIVDFGI 360 MQGVQWAALL QALATRPTGK PSRVRISGIP APALGAAPAA SLVATGNRLR DFAALLDLDF 420 EFDPILTPMS ELSAATFRVD PEESLTVNFM LQLCHLLGDS PEPVERVLRV AKSLGPRVVT 480 LGEYEASLNR AAFLERFRTA LAYYAAVFDS LDPAMQRDSA ERARVERLLF GRRILGVVGP 540 GDEQIRRERM EANEEWRAVM ERCGFETVPL S

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MAIAQQVIQQ KQQQQQRQQQ QQQQQLVAAS VNPFSTNPPP WGSSHQPQQH MTDHFPFVIP  60
DPATTFADPF APDPGFAAPP GGGHLDHGPF RLSGFGSAAS AVAAEFDSDE WMESLIGDSP  120
AESSDLMSDP WQGAAGGSGA LFADAFPSCS TDFSPPSPPA SASDLNHVLF SEHCEIAPLA  180
QVQHLHQAAA VVALNPHGPT AQTPSFDPPE LNKNSGGTAV VRDQAPESST SSQPLLESLL  240
DCAQIADSDP DLAAKSLIHV RETASESGDP TERVAFYFTE ALYRRLHGTQ RKQHSYPSTA  300
AAPPSCSSSS FDSSPEDFTL CYKALNDACP YSKFAHLTAN QAILEATESA ERIHIVDFGI  360
MQGVQWAALL QALATRPTGK PSRVRISGIP APALGAAPAA SLVATGNRLR DFAALLDLDF  420
EFDPILTPMS ELSAATFRVD PEESLTVNFM LQLCHLLGDS PEPVERVLRV AKSLGPRVVT  480
LGEYEASLNR AAFLERFRTA LAYYAAVFDS LDPAMQRDSA ERARVERLLF GRRILGVVGP  540
GDEQIRRERM EANEEWRAVM ERCGFETVPL S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66770.1	1e-118	GRAS family protein