PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW04183.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TCP

Protein Properties

Length: 426aa MW: 46441.6 Da PI: 7.5354

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW04183.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	130.3	1.9e-40	69	208	2	131
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............ssssasec...eaesssssasns 85 g+kdrhsk+ T++g+RdRR+Rls+++a++f+dLqd+LG+d++sk+ieWL+++a +ai el+ + + + + + ++s ++++ RWW04183.1 69 SGGKDRHSKVFTAKGLRDRRIRLSVSTAIQFYDLQDRLGYDQPSKAIEWLIKAAAAAINELPPLdcfpkppypcgdE------TvnaDRDVERSYDQQQ 161 689***********************************************************8775554443321......1343333344444445 PP TCP 86 ssgkaaksaakskksqksaasalnlak.esrakarararertrekmr 131 ++++ ++++ +s++s++s+ s+l+l++ es+ kar+rar r+++++ RWW04183.1 162 QQQHPSNKSGCSSSSDTSKGSVLSLSRpESSIKARERARGRETKNKD 208 555667777799999999999*****************6655544 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
MELEENNHAC KRSWAAGNGS QAAKIGRTEH QDEDEEDGER KGGGGADTSR RGPWQNHPSS 60 RIFRVSRASG GKDRHSKVFT AKGLRDRRIR LSVSTAIQFY DLQDRLGYDQ PSKAIEWLIK 120 AAAAAINELP PLDCFPKPPY PCGDETVNAD RDVERSYDQQ QQQQHPSNKS GCSSSSDTSK 180 GSVLSLSRPE SSIKARERAR GRETKNKDDR DDSGHIVASH HRNLNPQTSS FTELLTGGSS 240 RAIPVAAGDG NSSHNCIQKQ VSTADYFGQD CLFAQSQRSH PLPSGFSSQS HFGNSSPMGM 300 LSFNIAAAGD HPEMQQFSFL QDHLFPVAAT GDYNHNFSIS SGLAGFSRGT LQSNSPAHLP 360 QLHHDSHNHL QRLSSTVDGS NLQFFFGSAA SAANAENQLP AGFDGRLQLY YGDGYRHSDL 420 KGKGKS

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

MELEENNHAC KRSWAAGNGS QAAKIGRTEH QDEDEEDGER KGGGGADTSR RGPWQNHPSS  60
RIFRVSRASG GKDRHSKVFT AKGLRDRRIR LSVSTAIQFY DLQDRLGYDQ PSKAIEWLIK  120
AAAAAINELP PLDCFPKPPY PCGDETVNAD RDVERSYDQQ QQQQHPSNKS GCSSSSDTSK  180
GSVLSLSRPE SSIKARERAR GRETKNKDDR DDSGHIVASH HRNLNPQTSS FTELLTGGSS  240
RAIPVAAGDG NSSHNCIQKQ VSTADYFGQD CLFAQSQRSH PLPSGFSSQS HFGNSSPMGM  300
LSFNIAAAGD HPEMQQFSFL QDHLFPVAAT GDYNHNFSIS SGLAGFSRGT LQSNSPAHLP  360
QLHHDSHNHL QRLSSTVDGS NLQFFFGSAA SAANAENQLP AGFDGRLQLY YGDGYRHSDL  420
KGKGKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	1e-51	TCP family protein