PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW04251.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C3H

Protein Properties

Length: 204aa MW: 22345.7 Da PI: 8.6285

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW04251.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	27.6	5.2e-09	1	18	10	27
GGTS--TTTTT-SS-SSS CS zf-CCCH 10 artGtCkyGdrCkFaHgp 27 ++tG+Ck+G++CkF+H++ RWW04251.1 1 MKTGHCKFGSTCKFHHPQ 18 89**************97 PP
2	zf-CCCH	41	3.3e-13	147	173	1	27
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 +++++C+f++rtG Ck+G++Ck++H+p RWW04251.1 147 PGQPECQFYMRTGDCKFGATCKYHHPP 173 5789*********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence
MKTGHCKFGS TCKFHHPQQA EALVPSPAPA FYSPVQPLSI PSPQQYPPPV TWQFTRPSVF 60 PGSYMPGPYA PMLLSSGVVP VQGWNPYPVC EALVASVLVQ EDWRRVYGLP NQAFPLMPAY 120 SGPLTPVSSS VGPSNASRRG DKFPERPGQP ECQFYMRTGD CKFGATCKYH HPPDWSISKG 180 NCVLSPLGLP HRPVCISTSC HYLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47850.1	4e-49	C3H family protein