PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW04252.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 198aa    MW: 21469.4 Da    PI: 8.3088
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW04252.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH36.96e-12127153127
                 --S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                 ++++ C+++ rtG C+yG+rC+++H++
  RWW04252.1 127 PGEPDCSYYVRTGSCNYGERCRYNHPR 153
                 5789*********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MVSLPSAFHR LTTLTANGVT FSAVRDPYLL PLILGQVSQL TGFCLFMTWT PGDRRISATG  60
CTRSPAAYSL QSSIKLYASP YTEQTKHPAV LRPGLITAVD CSIIRSYSCG SRPLGLGEGS  120
SPYPERPGEP DCSYYVRTGS CNYGERCRYN HPRDRGALTG VGTGRTGAVE YLERVGQPVC  180
EVPCLPFLEF GFAQLNTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06410.15e-20C3H family protein