PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW04279.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C2H2
Protein Properties Length: 233aa    MW: 24319.7 Da    PI: 7.6085
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW04279.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.78.7e-056082123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C++C++ F ++  L  H++ H
  RWW04279.1 60 YECQYCSREFANSQALGGHQNAH 82
                99******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MSEIGYCPSK NSSSPRLKLF GFNVSEGEET GVGSDSFSPT TTTASGSGRG SGGGGEERKY  60
ECQYCSREFA NSQALGGHQN AHKKERQQLK RVQQQQQQLY HSGVGFGGLL YPRNPIGSAF  120
TPPPHLLSAG PPSPGPGPAD WVYHQSPFHV SHGCAFPSSS APRVTPGPAV FSYTTAGYGG  180
AHVYDVAQVA AGPSSFVKFS IDKVSTTTAV ESAVNDDSSG LDLKLSLATT NGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.15e-10C2H2 family protein