PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW04298.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 358aa    MW: 39699.2 Da    PI: 8.8396
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW04298.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF69.72.7e-22149197149
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 
                 kri+n+  rqv fskRr g++KKA+ELS+LC+ae  v++fs+ gk++ +
  RWW04298.1 149 KRIQNEEARQVCFSKRRSGLFKKASELSILCGAELGVVVFSPAGKVFSF 197
                 79********************************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
VVQVLFFEQL QLRRVITGTL LAADGEAAAP AAGGDGGGAW RASVRENQVL RLDMDSMRSR  60
VQELERECSS MKKTLAKLDE GGEGGAAAGE EEGEPRRKKE RWFGCRFSTQ VCDSHEGNVV  120
ESRRVGRELS PSLMVRRKPS MGRQKIEIKR IQNEEARQVC FSKRRSGLFK KASELSILCG  180
AELGVVVFSP AGKVFSFGHP SVDAVVDRFL IGTPRPRTTA TAVSTAVESR REANVRELNR  240
QCMELHDLVE AEKKKRDALE KAVKKEQAGR PFLWDADVES LSMEELQEFE RRLVELRSSV  300
ARRADQVLQE TLARKQQLSI IGNDVGVPGA FAVKHEVDVH PSLPSGFFGY GHGFFGSM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.14e-38M-type_MADS family protein