PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW04582.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TCP

Protein Properties

Length: 448aa MW: 46275.1 Da PI: 7.9575

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW04582.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	116.2	4.3e-36	176	264	6	100
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...........................ssssaseceaes 77 +r++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++ti+WLl+ a+pai+++tg+ s RWW04582.1 176 SRTKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIQWLLEHAEPAIIAATGSgtvpaiatniggtlkipteaptsapvtS----------- 263 69**********************************************************4444444444444444332221111110........... PP TCP 78 ssssasnsssgkaaksaakskks 100 + RWW04582.1 264 ----------------------T 264 ......................1 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MMLSVGTTTA GAAYPSRRTD ATNAPRRPLA CVVGPESLAA NREGPPTWVP LPHAGGPPHW 60 VGSSSRPPLL TSFSLRKHMG PISCSGEPRL QRGGKEKSCE LFRRSEGGDM ESQKHGEEDR 120 RRKTDLGAGG GGGGGGGGGA VPTPAVIPVH RFIVPKPEPM EMLGMRAFQI MRRPASRTKD 180 RHTKVEGRGR RIRMPAACAA RIFQLTRELG HKSDGETIQW LLEHAEPAII AATGSGTVPA 240 IATNIGGTLK IPTEAPTSAP VTSTSTPSAV DAASADDEGA GKKRRKKLQP SRTGGATVIA 300 GYYPVQDPLL PVGGAISISS GLAPTAGGAQ GMVPVWALGG GAAAASVIPP GALWVLPPPS 360 ATAGTSSQSQ AWTFPQAPQI VNLATSRPTS TDVLLSGGAP CVNVATTAGG RHELQLMSAS 420 GESLRGQAHE LDVDDEDEEA EEDSSEED

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MMLSVGTTTA GAAYPSRRTD ATNAPRRPLA CVVGPESLAA NREGPPTWVP LPHAGGPPHW  60
VGSSSRPPLL TSFSLRKHMG PISCSGEPRL QRGGKEKSCE LFRRSEGGDM ESQKHGEEDR  120
RRKTDLGAGG GGGGGGGGGA VPTPAVIPVH RFIVPKPEPM EMLGMRAFQI MRRPASRTKD  180
RHTKVEGRGR RIRMPAACAA RIFQLTRELG HKSDGETIQW LLEHAEPAII AATGSGTVPA  240
IATNIGGTLK IPTEAPTSAP VTSTSTPSAV DAASADDEGA GKKRRKKLQP SRTGGATVIA  300
GYYPVQDPLL PVGGAISISS GLAPTAGGAQ GMVPVWALGG GAAAASVIPP GALWVLPPPS  360
ATAGTSSQSQ AWTFPQAPQI VNLATSRPTS TDVLLSGGAP CVNVATTAGG RHELQLMSAS  420
GESLRGQAHE LDVDDEDEEA EEDSSEED

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	282	286	KKRRK
2	282	287	KKRRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	3e-42	TCP family protein