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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWW04619.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | ERF | ||||||||
| Protein Properties | Length: 281aa MW: 31783 Da PI: 9.396 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 55 | 2e-17 | 126 | 174 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
++kGVr+++ +g+W+AeIrdp ++r+r +lg+f taeeAa+a+ aa +le
RWW04619.1 126 RHKGVRQRR-WGKWAAEIRDP---NRRARLWLGTFATAEEAAAAYRAAVSQLE 174
58****998.**********8...335*********************98887 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 281 aa Download sequence |
MMEPRIQQLW SRYRMRRKRN MKKLDSLCSI RYLKPRMMRK KISGKLERSG AGRSTPVKRI 60 RVFFTDPDAT DSDDGDEAVM KQCKRVVREI HVDPIAKTLK TPADPENEKR QKRKEAARVV 120 VPSPGRHKGV RQRRWGKWAA EIRDPNRRAR LWLGTFATAE EAAAAYRAAV SQLEEKRRLH 180 HSGAAEGSAY SFVSVPSPSP SSDLTPPAAT AEEEAERSIA ELFRERQVEV PAEMDFDALD 240 GDAPFLLGEL GDELIGFDDG FDDLSLWGQP LDGGDFSFLD V |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G27950.1 | 2e-14 | ERF family protein | ||||




