PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW04682.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family SBP
Protein Properties Length: 270aa    MW: 29868.5 Da    PI: 9.9088
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW04682.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP132.21.8e-41176252278
                 -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
         SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                 CqvegC+ dl++ak+yhr+h++Ce hsk+p+v+v+g+e+rfCqqCsrfh+lsefD++krsCrrrL++hn+rrrk+q+
  RWW04682.1 176 CQVEGCNIDLTTAKDYHRKHRICESHSKSPKVIVAGQERRFCQQCSRFHHLSEFDQTKRSCRRRLSDHNARRRKPQP 252
                 **************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MDWVAKTPFQ WDWETLELFS EKENEICKPA QEPLLKSQGS MGICNGSVCS PRGEASSALE  60
LGNSSSKSFI SSSVDSLPKT EQRNLEFNFN SAEAAPHSSN KIIFARVGGS GTSPVPLAAG  120
RPKEPLTRLK LGQTFFEEGG AKNNVKSSSS LPPLTSSTAV AKKPRVPQQS SQSPYCQVEG  180
CNIDLTTAKD YHRKHRICES HSKSPKVIVA GQERRFCQQC SRFHHLSEFD QTKRSCRRRL  240
SDHNARRRKP QPATISFNSS RISSSFYGIT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43270.12e-48SBP family protein