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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWW04861.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | ERF | ||||||||
| Protein Properties | Length: 250aa MW: 27980.2 Da PI: 6.8 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 65.6 | 9.7e-21 | 82 | 131 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
++GVr+++ +g+WvAeIr p++ r+r +lg+f+taeeAa a+++a+ +l+ge
RWW04861.1 82 FRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDRAAFELRGE 131
8******9.**********955...5**************************97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 250 aa Download sequence |
MLPQHLLNQK DDFLGCSSSV GFSYLFPAHI QQIRAQLQYQ QQLMSAASER RNLGNADPLA 60 ARRRPMKRAG SAPSPPKPTK LFRGVRQRHW GKWVAEIRLP RNRTRLWLGT FDTAEEAALA 120 YDRAAFELRG EAARLNFPEL RRNGSHMGPP LHSSVDAKLQ TICDTMANSQ KPKSALTGSA 180 TTEEPGTSSE EFKSESSSSL EEDEPSSGSS AVSAMQHLDF TEAPWDESEN FVLRKYPSWE 240 IDWDSILSSD |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G78080.1 | 1e-49 | ERF family protein | ||||




