PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW04976.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 251aa MW: 28977.8 Da PI: 8.2248

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW04976.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.8	1.2e-18	29	76	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed+ll++ v+++G g+W+++++ g++R++k+c++rw +yl RWW04976.1 29 KGPWTPQEDKLLIEHVNLHGEGRWNSVSELSGLRRSGKSCRLRWVNYL 76 79********************************************97 PP
2	Myb_DNA-binding	30.9	6.3e-10	82	122	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ +++++++ W+tIar ++ gRt++++k++w+ + RWW04976.1 82 KGKITPEEENVILELHAL-----WSTIARSLP-GRTDNEIKNYWRRH 122 678899999999998886.....99*****.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MCHYGGDRQR LAAMERYFEA VTVEDGWRKG PWTPQEDKLL IEHVNLHGEG RWNSVSELSG 60 LRRSGKSCRL RWVNYLRPDL KKGKITPEEE NVILELHALW STIARSLPGR TDNEIKNYWR 120 RHFKKSKPSK NIEKARARFL RQQQQQQQQH QAVPPPPPPP QQQDDMRTIM NQVAQITLAQ 180 EMQQEMAYMY PLPYALQQQG GAAHGCVVDG PAAAAEDASW GSLWNLDDVH HDAERVCRGC 240 LQVQDQVLTF Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24310.1	5e-60	MYB family protein