PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW05122.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 276aa MW: 30528.7 Da PI: 8.9888

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW05122.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.1	6.7e-13	106	157	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+ +N+ ++ Lr+l+P + + +K + a+i+ A++++k+L+ RWW05122.1 106 QRMTHIAVERNRRRLMNEYLAVLRSLMPAS---YVQKGDQASIVGGAINFVKELE 157 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MALAEALGCT MKELCNMGCE IGGGGDGPRK LNRGREVAKG KRGTGSGSGS GWDTCCSSML 60 QNFDDWDVDS WSPKAGPAAV CQEGTADRRK RRRTKRFDNK EEVENQRMTH IAVERNRRRL 120 MNEYLAVLRS LMPASYVQKG DQASIVGGAI NFVKELEQSV QFLEAQKRIR ERSKAAPFAD 180 FFTFPQYSSS SSHCTSTCST DTTATGEAAG RNPSAMADIE VTIVGSHANV KIFSRWQPRQ 240 LLMLVLGLQN LRLTTLHLNV TSVDEMVLYC FSLKVR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	88	96	RRKRRRTKR
2	89	93	RKRRR
3	89	94	RKRRRT
4	89	96	RKRRRTKR
5	107	118	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	2e-53	bHLH family protein