PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW05145.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

NAC

Protein Properties

Length: 388aa MW: 43363.7 Da PI: 5.2612

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW05145.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.6	8.7e-52	11	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPt+eel+++yL+kkv+++k++l +vi++vd++k+ePwd+++k++ +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk ++s + RWW05145.1 11 VPPGFRFHPTEEELLNYYLRKKVTSEKIDL-DVIRDVDLNKLEPWDIQEKCRIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYS-S 107 69**************************.9***********964443122456**********************************.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +g++ktLvfy+grap+g+k+dW+mheyrl RWW05145.1 108 VTRIGMRKTLVFYRGRAPHGQKSDWIMHEYRL 139 889*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MSISVNTESC VPPGFRFHPT EEELLNYYLR KKVTSEKIDL DVIRDVDLNK LEPWDIQEKC 60 RIGSTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYSSVTR IGMRKTLVFY 120 RGRAPHGQKS DWIMHEYRLD DHSHLISHSN ASSSMGEGTN QEDAWVVCRV FKKKNHHKAI 180 DSPNNSSSVT SDAKTQLLHH PGGGDDDDDA LDQILQYMGR TCKRESQWTT TNIPSRNMEY 240 LRPIEIASSS GLQEMFMKLP APGSPTITPL PNSFPLDHSC DDQTSYGMSA AVDMGSAHRA 300 ETGSGDWAAF DRLLASQLNG PSEGPKPLDD DDDSGVGFHS SARVVHAADD DDYDDDYDDD 360 DQHGGDGDLW SLTRTSLSLS DRISHASL

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MSISVNTESC VPPGFRFHPT EEELLNYYLR KKVTSEKIDL DVIRDVDLNK LEPWDIQEKC  60
RIGSTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYSSVTR IGMRKTLVFY  120
RGRAPHGQKS DWIMHEYRLD DHSHLISHSN ASSSMGEGTN QEDAWVVCRV FKKKNHHKAI  180
DSPNNSSSVT SDAKTQLLHH PGGGDDDDDA LDQILQYMGR TCKRESQWTT TNIPSRNMEY  240
LRPIEIASSS GLQEMFMKLP APGSPTITPL PNSFPLDHSC DDQTSYGMSA AVDMGSAHRA  300
ETGSGDWAAF DRLLASQLNG PSEGPKPLDD DDDSGVGFHS SARVVHAADD DDYDDDYDDD  360
DQHGGDGDLW SLTRTSLSLS DRISHASL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-104	NAC family protein