PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW05146.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 421aa MW: 45730.8 Da PI: 8.9647

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW05146.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.4	1.4e-09	286	317	4	37
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS- CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskK 37 hn E+rRR++iN+++ L++llP+ + + kK RWW05146.1 286 VHNLSEKRRRNKINEKMRALQQLLPPhD---KVKK 317 5*************************55...6666 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MQRQSSKQRK RAREKDGKAS GRSKITRFCE KDPSNVGSNV AREDGLVPWI DEGLENDYGD 60 EFLGFGAGPP AAHKHRMAAG RSRCSAQQGR TPSNVAPTIA ESDAGGSDAA AQGHHCKDIA 120 VMASSKQMQQ PSGTTTTLMN FSHFARPVAL AKACLRNGGG GRRGGLRSVE KLSTLSSSNP 180 FASTPIQRSN GVEDVHRASG EPSSSMMSLR EAGLGEQPTA RKNPEAAAAS MCSGNFAGAG 240 LNQRKHGERT KEGEGEESEY NSEDLQDEWV GIRRRSKTKR SRVAEVHNLS EKRRRNKINE 300 KMRALQQLLP PHDKVKKFPS VGVCLPSVCL HTSPHNSTLL CDADDVDERS AMYATHGVTS 360 ACDGSSPGRR DEGVRHELRP WLSHGRNSTD SCAAVSLRSW TVQYMGRDFY EDQFLGCCSC 420 T

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MQRQSSKQRK RAREKDGKAS GRSKITRFCE KDPSNVGSNV AREDGLVPWI DEGLENDYGD  60
EFLGFGAGPP AAHKHRMAAG RSRCSAQQGR TPSNVAPTIA ESDAGGSDAA AQGHHCKDIA  120
VMASSKQMQQ PSGTTTTLMN FSHFARPVAL AKACLRNGGG GRRGGLRSVE KLSTLSSSNP  180
FASTPIQRSN GVEDVHRASG EPSSSMMSLR EAGLGEQPTA RKNPEAAAAS MCSGNFAGAG  240
LNQRKHGERT KEGEGEESEY NSEDLQDEWV GIRRRSKTKR SRVAEVHNLS EKRRRNKINE  300
KMRALQQLLP PHDKVKKFPS VGVCLPSVCL HTSPHNSTLL CDADDVDERS AMYATHGVTS  360
ACDGSSPGRR DEGVRHELRP WLSHGRNSTD SCAAVSLRSW TVQYMGRDFY EDQFLGCCSC  420
T

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	273	295	RRRSKTKRSRVAEVHNLSEKRRR
2	274	280	RRSKTKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	1e-14	bHLH family protein