PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW05284.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family bHLH
Protein Properties Length: 533aa    MW: 59254.6 Da    PI: 9.6193
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW05284.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.85.1e-10317384754
                 HHHHHHHHHHHHHHHHHHCTSCC.C......................TTS-STCHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPk.as...................kapskKlsKaeiLekAveYIksL 54 
                 ++ErrRR+r+N++++ Lr+++Pk +                      + + ++  +iL  +++Y+k+L
  RWW05284.1 317 MAERRRRKRLNDRLSMLRSVVPKiSKvscllraallllllprtdrTSRIRQMDRTSILGDTIDYMKEL 384
                 79*********************655*****************96556666***************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 533 aa     Download sequence    
MLLPPIFAPD APVTGHRGDR GRYHGVYGRD DYGGGYPRSP RRSPYRGGHD YSGYYDSRSR  60
RERSRSPYYD RSPERAAAGY GRRANGYASN KKKKKKKKKK KKKRYGDKKH STRSPEERPP  120
SKQGFPPPTP PPTGTPAQGQ RPAERPHQPP DTKPPPTAAA VTCLQCSACT PRYVRTPEME  180
LDELGFLEEL LSLRRDAWES FPAGMGEFFS GDGGFDCFQQ SPALMAPSFT AFDAVPPSFD  240
CLTEVCCPPG GVYSSSAGAP PEIQSSSVLS TLDDAEFGLA RGEWQSTEAP PAMFGLSSGC  300
VERKKKRLEG MPSKNLMAER RRRKRLNDRL SMLRSVVPKI SKVSCLLRAA LLLLLLPRTD  360
RTSRIRQMDR TSILGDTIDY MKELLERIKR LQEEIGVGPE QANLLSIFKE LNSNEILVRN  420
SPKFDVERRD DDTRIEICCA AKPGLLLSTV STLEALGLEI QQCVASCFND FGMQASCSEV  480
RWTVLSLQLQ PWVGHVGLRP AVLLQVMDQR AAISAEDIKQ ALFRSAGYGG RCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19197KKKKKKK
29199KKKKKKKKK
391103KKKKKKKKKKKKK
491104KKKKKKKKKKKKKR
59298KKKKKKK
692100KKKKKKKKK
792104KKKKKKKKKKKKK
89399KKKKKKK
993101KKKKKKKKK
1093105KKKKKKKKKKKKK
1194100KKKKKKK
1294102KKKKKKKKK
1394106KKKKKKKKKKKKK
1495101KKKKKKK
1595103KKKKKKKKK
1696102KKKKKKK
1796104KKKKKKKKK
1897103KKKKKKK
1997109KKKKKKKKKKKKK
2098104KKKKKKK
2198110KKKKKKKKKKKKK
2299111KKKKKKKKKKKKK
23303325RKKKRLEGMPSKNLMAERRRRKR
24304326RKKKRLEGMPSKNLMAERRRRKR
25305327RKKKRLEGMPSKNLMAERRRRKR
26319326ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.12e-70bHLH family protein