PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW05369.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TCP

Protein Properties

Length: 447aa MW: 48693.4 Da PI: 8.418

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW05369.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	110.1	3.3e-34	151	225	2	66
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..........s 66 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai++l++ RWW05369.1 151 TGRKDRHSKVSTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKAAIDQLAEVpawtpiatssR 225 79************************************************************9955553333221 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MCHLVLVLLF FVLETLCRQW CVRCWSTESS SFGVGDVIWE TWWPSLLEEE VRGKKLPLPA 60 SRADHHQPEQ QEVERKIASS SVATASTSED AHLSERMGEG QNHHGGLGFR QLAVHDRHQQ 120 RRVKPRSGFG RLRGAGGEIM EVHGGRIVRS TGRKDRHSKV STAKGPRDRR VRLSAHTAIQ 180 FYDVQDRLGY DRPSKAVDWL IKNAKAAIDQ LAEVPAWTPI ATSSRVPPPS NQSPVAEPDV 240 RSAFSFGGGD GGGGGGSGSN CLLQPSLDSD AIADDTMKSF ITMAATSPSS SPPPIRVQNY 300 LPRSTTQTQD LCLSLQSFQD PIFHHHQNPT PSAHNSLLAG SARLGFDPDS PSWPEHKQRM 360 APWNVAETSD GGGFGGFPFS VPPPQAVPTR WVLGPSQVFS QRGPLQSSNS PSARSWAEPM 420 AANAEIQMHP VLHPSVSSST SQHGFRA

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MCHLVLVLLF FVLETLCRQW CVRCWSTESS SFGVGDVIWE TWWPSLLEEE VRGKKLPLPA  60
SRADHHQPEQ QEVERKIASS SVATASTSED AHLSERMGEG QNHHGGLGFR QLAVHDRHQQ  120
RRVKPRSGFG RLRGAGGEIM EVHGGRIVRS TGRKDRHSKV STAKGPRDRR VRLSAHTAIQ  180
FYDVQDRLGY DRPSKAVDWL IKNAKAAIDQ LAEVPAWTPI ATSSRVPPPS NQSPVAEPDV  240
RSAFSFGGGD GGGGGGSGSN CLLQPSLDSD AIADDTMKSF ITMAATSPSS SPPPIRVQNY  300
LPRSTTQTQD LCLSLQSFQD PIFHHHQNPT PSAHNSLLAG SARLGFDPDS PSWPEHKQRM  360
APWNVAETSD GGGFGGFPFS VPPPQAVPTR WVLGPSQVFS QRGPLQSSNS PSARSWAEPM  420
AANAEIQMHP VLHPSVSSST SQHGFRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	1e-57	TCP family protein