PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW05377.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family SBP
Protein Properties Length: 495aa    MW: 55494.8 Da    PI: 10.6025
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW05377.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP41.24.5e-131922224878
                 SEEETTT--SS--S-STTTT-------S--- CS
         SBP  48 rfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                 rfh+lsefD++krsCrrrL++hn+rrrk+q 
  RWW05377.1 192 RFHALSEFDQKKRSCRRRLSDHNARRRKPQL 222
                 8***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 495 aa     Download sequence    
MDWTSKIPFS FDWETLALLN GEETEISKSA QELKSKIGNG IGMGNGSVYL SGGDMFSSSE  60
AGYHSFKSSI AASDSTSNAK KKIPELNFES VGGFLVNQNK NKDLARVDVS ETSPAVASAE  120
GTKEPVISLK LGKRTYFEDP CMRNNIKSSY FPASNPLLTT SVKKSRGYQQ NLLKAYCQLF  180
KCIRLPSWSS FRFHALSEFD QKKRSCRRRL SDHNARRRKP QLETISFSSS KLSVSYYGYR  240
YADRPLGYRY ADRPLPGGTA KIDRRRPIEG EIDRRRSISG EKGKNKKKRK RRKKNKRSRR  300
KKYLFSLHRP HLREVAALAC RRFFSHDKQQ ANLVFGQSPF RQMTSIPSSI WDGSGSFKLT  360
QSEGSWRKSS KTGSTNGQLL FPSNAHLSNV YTGHDMDSLL ALKGTTAEIL NQGLEATATF  420
HLDGAPDLWR ALSLLSTNKS RSPPITGHAN DACPEQPLSQ VLPFELRSDG GHQLRESPLF  480
KPFFGTGFVD TSHLS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1202219KKRSCRRRLSDHNARRRK
2274291KKRSCRRRLSDHNARRRK
3282294KGKNKKKRKRRKK
4286292KKKRKRR
5286294KKKRKRRKK
6286302KKKRKRRKKNKRSRRKK
7286303KKRSCRRRLSDHNARRRK
8287293KKKRKRR
9287303KKKRKRRKKNKRSRRKK
10287292KKRKRR
11287294KKRKRRKK
12287304KKRSCRRRLSDHNARRRK
13288294KKKRKRR
14288304KKKRKRRKKNKRSRRKK
15288305KKRSCRRRLSDHNARRRK
16288293KRKRRK
17289301KGKNKKKRKRRKK
18289297KKKRKRRKK
19289305KKKRKRRKKNKRSRRKK
20290302KGKNKKKRKRRKK
21290306KKKRKRRKKNKRSRRKK
22291307KKKRKRRKKNKRSRRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43270.17e-18SBP family protein