PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW05498.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family C3H
Protein Properties Length: 377aa    MW: 40916.9 Da    PI: 5.7867
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW05498.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH41.13e-13292317126
                 --S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                 +ktelC+ + ++G C+yG+ C+FaHg
  RWW05498.1 292 FKTELCNKWEESGVCPYGEHCRFAHG 317
                 79***********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MQRELVSSGG GDCLGVSMAS APSPYICNGD DVLSPYTVFS TIDTAPLPAS GSFAISPSSV  60
SFEEAEASST ATEDRLCLAR LALQYQEITE RYGICLSHLC DTSMEVESLR RDNASLRTAN  120
GELARRLDLL AGKHTGRFPS SADVVRVDEL PRLSIAETPN SGDSPTSVLT FRESSCGGHR  180
SATGPVTENH VSPPKITNVR SSGYLNLNSV GEPGLDTNRN DRFRVPSPVM IGSVSILFSI  240
PLIFLAEKLQ QAHLGGGSNN GNGERVGGED DENEGESGSG ALELEVFRQG MFKTELCNKW  300
EESGVCPYGE HCRFAHGIAE LRPVLRHPRY KTELCRMILF GDACTYGHRC HFRHSLPPLR  360
PSTPPPPPLK RIDYSLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68200.11e-44C3H family protein