PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW05939.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 180aa MW: 18888.4 Da PI: 8.7894

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW05939.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.8	0.0015	57	79	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H RWW05939.1 57 FECKTCNRQFPSFQALGGHRASH 79 89**********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence
MDVLKDTKRY RLGGGGGGGG GEQNDSVNMA NVLMLLSQGG GGGDGGAEKR DHSGRVFECK 60 TCNRQFPSFQ ALGGHRASHK KPRLGGDGHG HGQMQGGAAK PRVHECSVCG LEFAIGQALG 120 GHMRRHRATA EGFGHVLGEK PPRDHRGMLL DLNLPPLETD PKLGLGLEIV DKTPMVGCGH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	5e-32	C2H2 family protein