PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW06343.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C3H

Protein Properties

Length: 537aa MW: 58069 Da PI: 6.7783

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW06343.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	25.7	2e-08	350	371	4	26
---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHg 26 ++C +far G+Ck G C+F Hg RWW06343.1 350 RPCLYFAR-GYCKNGTACRFLHG 371 69****.***********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 537 aa Download sequence
MLKIWKRDDG CLRTLVLNKR SGPARHLLEE DHNHHSSNGD ILVLKSGCFS TQFASLSDTC 60 NHRQWRCSRS AVLVVGNGVS QWQGAATLKN YKSGGGEVLQ SIDLSMDANE ATRIVFSRIQ 120 NLDPEHAPRI MGLLLLQEHG EKEMIRLAFG PESLLRSLVL KAWKQLGLVP DPSSSAPCKP 180 FGGGSSASPF LLRQNSASRL SSRGLPSPLA VSSPSLWRSN SSSGCNGLNG SSDEFQNSDE 240 LISPGNVRAS PFYGVGGGGG DLIDEFHRSD QLSFLGDAAA VSDYSHPFSF ASKHGGDGFQ 300 PDIECRSPSS GDCTLFPYGV GLGVDGHYHR RSFSAAELGL GDPAAGFGWR PCLYFARGYC 360 KNGTACRFLH GLPEEAVVGG TKMDTVLEQQ CQELLLRSKS QRIDGASQLA ASAFPYSQTG 420 SVPPSPSSSS NSLSFLLQQQ LQNEGQRATA VAAAAALMLG GDDTHKFVCR SRFERNDFMA 480 NPGSRQIYLT FPADSTFSEE DVSNYFRLVD NSLVPTDRYM ALQFFNAHDL PFSALMS

Sequence ? help Back to Top

Protein Sequence Length: 537 aa Download sequence

MLKIWKRDDG CLRTLVLNKR SGPARHLLEE DHNHHSSNGD ILVLKSGCFS TQFASLSDTC  60
NHRQWRCSRS AVLVVGNGVS QWQGAATLKN YKSGGGEVLQ SIDLSMDANE ATRIVFSRIQ  120
NLDPEHAPRI MGLLLLQEHG EKEMIRLAFG PESLLRSLVL KAWKQLGLVP DPSSSAPCKP  180
FGGGSSASPF LLRQNSASRL SSRGLPSPLA VSSPSLWRSN SSSGCNGLNG SSDEFQNSDE  240
LISPGNVRAS PFYGVGGGGG DLIDEFHRSD QLSFLGDAAA VSDYSHPFSF ASKHGGDGFQ  300
PDIECRSPSS GDCTLFPYGV GLGVDGHYHR RSFSAAELGL GDPAAGFGWR PCLYFARGYC  360
KNGTACRFLH GLPEEAVVGG TKMDTVLEQQ CQELLLRSKS QRIDGASQLA ASAFPYSQTG  420
SVPPSPSSSS NSLSFLLQQQ LQNEGQRATA VAAAAALMLG GDDTHKFVCR SRFERNDFMA  480
NPGSRQIYLT FPADSTFSEE DVSNYFRLVD NSLVPTDRYM ALQFFNAHDL PFSALMS