PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW06454.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

AP2

Protein Properties

Length: 598aa MW: 63571.7 Da PI: 5.6018

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW06454.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	23.1	1.9e-07	283	339	1	55
AP2 1 sgykGV...rwdkkrgr....WvAeIrdpseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV + + ++A+++d + +r + + g+ gt eeAa+a++ a+ k++g RWW06454.1 283 SIYRGVtrfTMQ----SslekYEAHLWD----NscRReGQTRKGRQGTQEEAAEAYDIAAIKFRG 339 5699444444....34555999....3354469999******************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 598 aa Download sequence
MNNWLGFSLS PQELPPPQTQ RIHPSPGIIS ADEVSADCYG LSPDSSSTPP LGIPTLRPDG 60 SFGILEALNR PGHHSQDWSM KSLEYKGSSS ELSMLVGSSS NQNTMDDQQP KLEDFLGGHS 120 FAQHNQKLPS IAGNYDNPSH YMYSHGCSSG GLLSSSGGCS SSSIGLSVIK TWLRNQPAPP 180 LQVEGNGSDE AGCSNMNSSV GGTVAGNVGG TLTTSQSLSL SMSTGSQSSS PLPLLAAAVS 240 GGGESSSSEN KQKDGNGSGL DAQSGAMEAV PRKSIDTFGQ RTSIYRGVTR FTMQSSLEKY 300 EAHLWDNSCR REGQTRKGRQ GTQEEAAEAY DIAAIKFRGL NAVTNFDMSR YDVKAILESS 360 TLPIGGAAKR LKEISDHAEA SVDGRMTDDG SITSHLTDTI SSYGSHHHGW PTIAFQQAQP 420 LSFHYPYGQP RGWCKQEQDA VVFASHGLQD LQHLNLGSNT HNFFQPSMIH NLMSLESSSS 480 VDHSTAGSNA VIYNGNVGGS NGNYNVDGTG GYVMPYSESE GKQMAYENML AAGDPCGGKS 540 IYYLPQQSTS SSMVKENGYD HINGYNNWMP ATVQAPSAGG NNVTVCHGAP LFTIWNDS

Sequence ? help Back to Top

Protein Sequence Length: 598 aa Download sequence

MNNWLGFSLS PQELPPPQTQ RIHPSPGIIS ADEVSADCYG LSPDSSSTPP LGIPTLRPDG  60
SFGILEALNR PGHHSQDWSM KSLEYKGSSS ELSMLVGSSS NQNTMDDQQP KLEDFLGGHS  120
FAQHNQKLPS IAGNYDNPSH YMYSHGCSSG GLLSSSGGCS SSSIGLSVIK TWLRNQPAPP  180
LQVEGNGSDE AGCSNMNSSV GGTVAGNVGG TLTTSQSLSL SMSTGSQSSS PLPLLAAAVS  240
GGGESSSSEN KQKDGNGSGL DAQSGAMEAV PRKSIDTFGQ RTSIYRGVTR FTMQSSLEKY  300
EAHLWDNSCR REGQTRKGRQ GTQEEAAEAY DIAAIKFRGL NAVTNFDMSR YDVKAILESS  360
TLPIGGAAKR LKEISDHAEA SVDGRMTDDG SITSHLTDTI SSYGSHHHGW PTIAFQQAQP  420
LSFHYPYGQP RGWCKQEQDA VVFASHGLQD LQHLNLGSNT HNFFQPSMIH NLMSLESSSS  480
VDHSTAGSNA VIYNGNVGGS NGNYNVDGTG GYVMPYSESE GKQMAYENML AAGDPCGGKS  540
IYYLPQQSTS SSMVKENGYD HINGYNNWMP ATVQAPSAGG NNVTVCHGAP LFTIWNDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	6e-24	AP2 family protein