PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW08260.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

NAC

Protein Properties

Length: 402aa MW: 44918.1 Da PI: 8.7502

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW08260.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.7	9.1e-53	226	378	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.......................kvkaeekewyfFskrdkkyatgkrkn 75 lppGfrFhPtdeel+ +yL +k+ +++++ ++i+evd++k+ePw+Lp + k+k +e+ewyfFs rd+ky+tg r+n RWW08260.1 226 LPPGFRFHPTDEELIAHYLLQKALDSSFTS-RAIAEVDLHKCEPWELPgQtqslhaslcstflsfqacildaeKAKMGEEEWYFFSLRDRKYPTGLRTN 323 79***********************999.89**********95489***********9999887777999*************** PP NAM 76 ratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129 rat +gyWkatgkdke++s+ +++lvg+kktLvfy+grapkgek++Wvmheyrle RWW08260.1 324 RATGAGYWKATGKDKEIYSTrTKSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 378 **************9866778**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
GIRAPRSVPE EPTLLDAHFS QSRCVEAQSV MSPAFPHPSL SGGRFGGRKT AGREGTGGDL 60 RKKGTKNRGD EINRPNLNTI RTQIGPKTME EKVSDGMGGT TKTRRDKACS FSHTISEMLQ 120 RRDETWSSFF PSPYASDISS PLHRSTANCL LELPTFDPPC SGTGDASAHC SCCMERLAFA 180 CGFLALFCSA LLLIGSLAHV LASSHNHFTW MTMFGNHFHS IEPQQLPPGF RFHPTDEELI 240 AHYLLQKALD SSFTSRAIAE VDLHKCEPWE LPGQTQSLHA SLCSTFLSFQ ACILDAEKAK 300 MGEEEWYFFS LRDRKYPTGL RTNRATGAGY WKATGKDKEI YSTRTKSLVG MKKTLVFYRG 360 RAPKGEKSNW VMHEYRLEGR FAFHFLCGSS KVCMWLSVFS QR

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

GIRAPRSVPE EPTLLDAHFS QSRCVEAQSV MSPAFPHPSL SGGRFGGRKT AGREGTGGDL  60
RKKGTKNRGD EINRPNLNTI RTQIGPKTME EKVSDGMGGT TKTRRDKACS FSHTISEMLQ  120
RRDETWSSFF PSPYASDISS PLHRSTANCL LELPTFDPPC SGTGDASAHC SCCMERLAFA  180
CGFLALFCSA LLLIGSLAHV LASSHNHFTW MTMFGNHFHS IEPQQLPPGF RFHPTDEELI  240
AHYLLQKALD SSFTSRAIAE VDLHKCEPWE LPGQTQSLHA SLCSTFLSFQ ACILDAEKAK  300
MGEEEWYFFS LRDRKYPTGL RTNRATGAGY WKATGKDKEI YSTRTKSLVG MKKTLVFYRG  360
RAPKGEKSNW VMHEYRLEGR FAFHFLCGSS KVCMWLSVFS QR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	6e-82	NAC family protein