PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW08357.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TCP

Protein Properties

Length: 350aa MW: 36001.3 Da PI: 5.271

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW08357.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	114.3	1.6e-35	72	173	6	113
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaakskksqksa 104 +r++++hTkv+gR+RR+R++a+caar+F+L++eLG+++ ++ti+WLl+ a+pai ++tgt++ +a ++ + +++ +++ +a+++a+ +++++a RWW08357.1 72 SRTKDRHTKVEGRGRRIRMPAPCAARIFQLTRELGHKSEGETIQWLLERAEPAILAATGTGTVPAIAT------NVGGTLKIPTEAPTSAPVTSTSAPA 164 69**********************************************************77777333......1111111111111111111111111 PP TCP 105 asalnlake 113 a+ + a + RWW08357.1 165 AADDEEAGK 173 111111111 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MESERRGDGE DRPGKSDLRA GGGDGGGGDV GGGAVATPPA AVIPVHRFIV PKPEHIEMLG 60 MGAFQLIRRP ASRTKDRHTK VEGRGRRIRM PAPCAARIFQ LTRELGHKSE GETIQWLLER 120 AEPAILAATG TGTVPAIATN VGGTLKIPTE APTSAPVTST SAPAAADDEE AGKKRRKKLQ 180 PSRTGRSAAI AGHYPVQDPL LPVGGAISIP SGLAPIGAGV QGVVPMWALG GSAAGASLIP 240 PGALWVLPQP STAVAGTSTQ SQVWTFPQTP QIIQLASARP ISAGALFSGV NVATGPEGEP 300 STASPPAAGG KHEPRLMSAP VASRRGQVQE LDEDDEDEDE EDEDDSSAED

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MESERRGDGE DRPGKSDLRA GGGDGGGGDV GGGAVATPPA AVIPVHRFIV PKPEHIEMLG  60
MGAFQLIRRP ASRTKDRHTK VEGRGRRIRM PAPCAARIFQ LTRELGHKSE GETIQWLLER  120
AEPAILAATG TGTVPAIATN VGGTLKIPTE APTSAPVTST SAPAAADDEE AGKKRRKKLQ  180
PSRTGRSAAI AGHYPVQDPL LPVGGAISIP SGLAPIGAGV QGVVPMWALG GSAAGASLIP  240
PGALWVLPQP STAVAGTSTQ SQVWTFPQTP QIIQLASARP ISAGALFSGV NVATGPEGEP  300
STASPPAAGG KHEPRLMSAP VASRRGQVQE LDEDDEDEDE EDEDDSSAED

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	173	177	KKRRK
2	173	178	KKRRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	3e-41	TCP family protein