PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW08481.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 705aa MW: 78292 Da PI: 9.2348

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW08481.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	85	9.2e-27	81	200	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...................................rergferspkqCkekwenlnkrykki 64 rW++qe+l+L+e+r+++++r+r+++ k+plW+evs+++ +e+g++rs k+C+ek+enl k+ykk+ RWW08481.1 81 RWPRQETLTLLEVRSRLDSRFREAAHKGPLWDEVSRYInnsffsglyeylykirqlpepynadpastecrimaEEHGYHRSGKKCREKLENLYKYYKKT 179 8************************************************************************************************ PP trihelix 65 kegekkrtsessstcpyfdqlea 87 keg+ +r ++ +++++f+qlea RWW08481.1 180 KEGKAGR--QDGKHYRFFRQLEA 200 *98..55667*****85 PP
2	trihelix	44.8	3.2e-14	384	460	1	75
trihelix 1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtses 75 rW+++e+ ++ rr+me +l++ g+ k++lW evs++ + g +rs+k Cke+w+++nkr +k ke++kkr+ ++ RWW08481.1 384 RWPESETAGGVRTRRSMEAELGEgGSGKAGLWGEVSAAAvACLGSNRSAKGCKERWDDINKRPRKAKESQKKRRRNA 460 8*******************956899***986559*****************************96554 PP

Sequence ? help Back to Top
Protein Sequence Length: 705 aa Download sequence
IAGKPGFSAV SDVSDPAHFL GQHRSSFIPA PGPDRQQYGM LVAGSRGGEV DLPPPPPLPP 60 PGMESFGFYE TAFGGGGGQG RWPRQETLTL LEVRSRLDSR FREAAHKGPL WDEVSRYINN 120 SFFSGLYEYL YKIRQLPEPY NADPASTECR IMAEEHGYHR SGKKCREKLE NLYKYYKKTK 180 EGKAGRQDGK HYRFFRQLEA LYGGSSSATA VIIQPCSKPT YASALPSNRE ALQVSRFSGN 240 VSLSSSSEFD GTSSTGEEED GSMRRVKTGR NSWKSKVEEL VEEQIKRFIG VQETWMNQML 300 RTLEHMEQAR ISREEDWRRQ EAARVDREYG LWASERAWME ARDSAIIQAL EKISRREVRP 360 QPEEDRSANG EHGDEADGNW AAQRWPESET AGGVRTRRSM EAELGEGGSG KAGLWGEVSA 420 AAVACLGSNR SAKGCKERWD DINKRPRKAK ESQKKRRRNA ATNKHGEGSW SDDPSGCHEE 480 GEQGSDVAVG LALADGPPSP PPDYGGGVND ISFLFSVSED ECPWENNGGV RNTDKPTMMQ 540 GHNSKRKSGC IGQGYKRLLR ARGVGDWSRS RGTRHLERCH RVQLRNDNTA SSSSTNNGRK 600 KGLAAYFRPS PASGRDETRG RGGQGGTARP SLPPDHMKPA NGNRNSSQIH DSCLLISGSR 660 DVHHVPKLPY MVNSLHRQLT QVRLPPPCTA CCRQWTQHSV MLNTS

Sequence ? help Back to Top

Protein Sequence Length: 705 aa Download sequence

IAGKPGFSAV SDVSDPAHFL GQHRSSFIPA PGPDRQQYGM LVAGSRGGEV DLPPPPPLPP  60
PGMESFGFYE TAFGGGGGQG RWPRQETLTL LEVRSRLDSR FREAAHKGPL WDEVSRYINN  120
SFFSGLYEYL YKIRQLPEPY NADPASTECR IMAEEHGYHR SGKKCREKLE NLYKYYKKTK  180
EGKAGRQDGK HYRFFRQLEA LYGGSSSATA VIIQPCSKPT YASALPSNRE ALQVSRFSGN  240
VSLSSSSEFD GTSSTGEEED GSMRRVKTGR NSWKSKVEEL VEEQIKRFIG VQETWMNQML  300
RTLEHMEQAR ISREEDWRRQ EAARVDREYG LWASERAWME ARDSAIIQAL EKISRREVRP  360
QPEEDRSANG EHGDEADGNW AAQRWPESET AGGVRTRRSM EAELGEGGSG KAGLWGEVSA  420
AAVACLGSNR SAKGCKERWD DINKRPRKAK ESQKKRRRNA ATNKHGEGSW SDDPSGCHEE  480
GEQGSDVAVG LALADGPPSP PPDYGGGVND ISFLFSVSED ECPWENNGGV RNTDKPTMMQ  540
GHNSKRKSGC IGQGYKRLLR ARGVGDWSRS RGTRHLERCH RVQLRNDNTA SSSSTNNGRK  600
KGLAAYFRPS PASGRDETRG RGGQGGTARP SLPPDHMKPA NGNRNSSQIH DSCLLISGSR  660
DVHHVPKLPY MVNSLHRQLT QVRLPPPCTA CCRQWTQHSV MLNTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	2e-67	Trihelix family protein