PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW08658.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family Whirly
Protein Properties Length: 158aa    MW: 17622.3 Da    PI: 10.3678
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW08658.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly521.5e-1691157154
      Whirly   1 svyktkaalkvkavrptfeald.............sgnlklkraGglllelanataerkydWekkqs 54 
                 s+yk+kaal+v++++p+f  ld             sg+ k++++G++ll++a+a+a+r+ydW++kq+
  RWW08658.1  91 SIYKGKAALTVEPRAPEFAPLDfvkftvvdllvvqSGAYKVSKEGFILLQFAPAAATRQYDWSRKQV 157
                 7***************99765333333333444449*****************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MYSPSCPRPV RPYPHLLPAS SAPLNSSFSC PRTLTLGRKK KAQLFVRCRR SDYFDQQRLF  60
ARPPSPPQDE PSSLASQPPG AQPSRVFVGY SIYKGKAALT VEPRAPEFAP LDFVKFTVVD  120
LLVVQSGAYK VSKEGFILLQ FAPAAATRQY DWSRKQVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14410.19e-32Whirly family protein