PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW08731.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 245aa MW: 28335 Da PI: 6.5796

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW08731.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.6	1.4e-13	3	45	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed+ lv+ v+++G ++W+ Ia+ g k+c++rw +yl RWW08731.1 3 KGPWTEQEDLHLVCFVRLFGERRWDFIAKVSG-----KSCRLRWVNYL 45 79****************************.....*******97 PP
2	Myb_DNA-binding	51.4	2.5e-16	51	95	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+T++E l +++++++G++ W++Iar+++ gRt++++k++w+ + RWW08731.1 51 RGRMTPQEKHLVLELHALWGNR-WSRIARKLP-GRTDNEIKNYWRAH 95 89******************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MRKGPWTEQE DLHLVCFVRL FGERRWDFIA KVSGKSCRLR WVNYLHPGLK RGRMTPQEKH 60 LVLELHALWG NRWSRIARKL PGRTDNEIKN YWRAHMRKMT KERKRSSSSS RVDHSLDLTE 120 LPLQAAAEAH DLKSTTSASS CCLTAEELEK KEEGVASYSL DQIWNEIATS EVINELSFED 180 SCPLMPSSPT WECCSEAVWK IDDDEELRML LETDHLISTH NDGGRETCSL AHQPDHFSFS 240 PMYSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59780.3	1e-65	MYB family protein