PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW08798.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 159aa    MW: 17351.6 Da    PI: 10.968
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW08798.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.59.6e-30105155151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                 krienk  rqvtfskRrng+lKKA+ELSvLCd+e+ +i+fs++gklye+ss
  RWW08798.1 105 KRIENKASRQVTFSKRRNGLLKKAFELSVLCDVEIGLIVFSPRGKLYEFSS 155
                 79***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MSSFTSESIA SSAVSIEAGG RGRHVTGGDR DDPLRTTTWH HPVRVTYGSV RGEENPPSGA  60
RGFPVPSQRG NRVPETHGGA ASRWKAGLLP GESSILMVRG KTEMKRIENK ASRQVTFSKR  120
RNGLLKKAFE LSVLCDVEIG LIVFSPRGKL YEFSSSRCH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11880.16e-34MIKC_MADS family protein