PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW08864.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 200aa    MW: 22036.3 Da    PI: 8.397
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW08864.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260109.62.3e-3437128196
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelal 96 
                 +C aCk+lrrkC++dC++apyf ++q p++fa++hk+FGasnv+kll+++p ++r +a+++++yeA+ar++dPvyG+v      q q++q+ka+la+
  RWW08864.1  37 PCGACKFLRRKCTSDCIFAPYFGSDQsPAQFAAIHKVFGASNVSKLLAQVPVHDRCEAVATIAYEAQARIKDPVYGSVL-----QAQVMQVKAQLAY 128
                 7*********************999989************************************************984.....4555555555544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MSLPTKAPIK TTCSLFRSLK PQQSIDLPSM ATGAGSPCGA CKFLRRKCTS DCIFAPYFGS  60
DQSPAQFAAI HKVFGASNVS KLLAQVPVHD RCEAVATIAY EAQARIKDPV YGSVLQAQVM  120
QVKAQLAYRA ALSRVLEDQQ CQDNFSVFLQ SDSEYGADGV LLMQQMGCRE DVSTQEFSRK  180
RTPHHEFGEL QAMAQRMMRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42430.12e-51LBD family protein