PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW09054.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 466aa MW: 50281.1 Da PI: 6.7073

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW09054.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	23.9	7.7e-08	225	265	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 rrRR+ri +++ L++l+P K++ a++L +A +Y+k L RWW09054.1 225 ARRRRERISQRLRVLQRLVPGG-----SKMDTATMLDEAANYLKFL 265 69****************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MESLDSDLYG KLDLEACFLG SSVQLQGTGD MEETLCALLD RQAMMRLGAP CEAAASFRAI 60 SRAEKVNRCC SLTQDFGLSD DLPVISDISH DEDVISAIFP DSGNLRNLSC TGNVSSGESE 120 NYGSFDDLKW NRDEMASRVF PDPLLPAAKR KPNSSPEEEG RQKNPRSEKH SGSVAIETIA 180 EAKEMIYRAA ALRPLTLGAE AAAAAAEKPK RKNVKISSDP QTVAARRRRE RISQRLRVLQ 240 RLVPGGSKMD TATMLDEAAN YLKFLKSQKG SRWSQIKSGF CGWGFLLPVA GFTRSLLLVL 300 SVRSLPARPR GHDSHALSTV ADNFVAGASI LGHANDTAKG GSPPAHVATY KVCWPRTFRG 360 DCFDADIIAA FDAAIHNGVD ILDFVADTGP SLPPAPLMRG APPSAHPCSN ITRRQTTLTV 420 AADLIDGLQM KSVVRSILVT SDAWPPPPIA TRASIEVPII EEINTE

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MESLDSDLYG KLDLEACFLG SSVQLQGTGD MEETLCALLD RQAMMRLGAP CEAAASFRAI  60
SRAEKVNRCC SLTQDFGLSD DLPVISDISH DEDVISAIFP DSGNLRNLSC TGNVSSGESE  120
NYGSFDDLKW NRDEMASRVF PDPLLPAAKR KPNSSPEEEG RQKNPRSEKH SGSVAIETIA  180
EAKEMIYRAA ALRPLTLGAE AAAAAAEKPK RKNVKISSDP QTVAARRRRE RISQRLRVLQ  240
RLVPGGSKMD TATMLDEAAN YLKFLKSQKG SRWSQIKSGF CGWGFLLPVA GFTRSLLLVL  300
SVRSLPARPR GHDSHALSTV ADNFVAGASI LGHANDTAKG GSPPAHVATY KVCWPRTFRG  360
DCFDADIIAA FDAAIHNGVD ILDFVADTGP SLPPAPLMRG APPSAHPCSN ITRRQTTLTV  420
AADLIDGLQM KSVVRSILVT SDAWPPPPIA TRASIEVPII EEINTE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	210	229	KRKNVKISSDPQTVAARRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	9e-30	bHLH family protein