PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW09234.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 239aa MW: 25509.4 Da PI: 7.4727

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW09234.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.4	0.001	88	110	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+F++ L H +H RWW09234.1 88 YQCKTCNKCFPSFQALGGHRTSH 110 9***********99998888777 PP
2	zf-C2H2	13.4	0.00023	152	174	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H RWW09234.1 152 HECSICGSEFPSGQALGGHMRRH 174 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MDYGNRSSNS DQFTASPVVK GKRTKRQRPA PASSAELSSS TTEEEEDMAN CLILLSRGRA 60 VDAGPPGTQT AAEEPAMATT GKAAPDVYQC KTCNKCFPSF QALGGHRTSH KKPRADEDRV 120 QISTSSSTSK PAPTPSATNT GVGAGSNKPR VHECSICGSE FPSGQALGGH MRRHRPITPA 180 EPPEAKKEKH VLSLDLNLPA PPDDDREELP RPASSAMPFP FELQQPLVFS ASALVDCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	9e-33	C2H2 family protein