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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RWW09413.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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| Family | GRAS | ||||||||
| Protein Properties | Length: 392aa MW: 44168.9 Da PI: 7.2193 | ||||||||
| Description | GRAS family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | GRAS | 424.3 | 1e-129 | 23 | 391 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
+elL++cAea+s+++ + + l+++ + +s +g+p+qRl ay++e+L ar +s++++y+al+++e + s+e l++++++++++P+lkf++++aN
RWW09413.1 23 KELLIKCAEALSENKIDKFELLIEEARGVVSISGEPIQRLGAYMLEGLVARQESSGTNIYSALRCREPE---SKELLSYMRILYDICPYLKFGYMAANG 118
689*****************************************************************9...9************************** PP
GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
aI +a+++e+r+HiiDf+i qG+QW++L+qaLa Rp+gpp++RiTg+++p+s+ + + l+ +g+ L+++ +++++p+ef+ l +++ e+L+++
RWW09413.1 119 AIADALKNENRIHIIDFQIAQGTQWITLIQALAVRPGGPPHVRITGIDDPTSEyaRGDGLQLVGKMLSDMSKKFNIPLEFKGL-PVYGPEITREMLEIR 216
***************************************************99999**************************6.77899999******* PP
GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
pgEalaVn+ lqlh+++de v+++++rd +L++vk+lsP+v ++veqe+++n++sFl+rf+e+++yysa+++s++a+l r+s+eri+vE+++l+++ivn
RWW09413.1 217 PGEALAVNFTLQLHHTPDEGVDVNNPRDGLLRMVKGLSPRVTTLVEQESNTNTTSFLTRFVETFDYYSAMLESIDATLTRDSKERINVEQHCLAKDIVN 315
*************************************************************************************************** PP
GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
++aceg++r+erhe l+kWr+rl++aGFkp+pls+++++ +k+ll ++ d y++ e++g+++lgWk+r+L+s+SaW
RWW09413.1 316 IIACEGKDRVERHELLGKWRSRLSMAGFKPYPLSSYVNSVIKTLLGYYS-DKYTLVEKDGAMLLGWKNRNLISASAW 391
*********************************************9999.55************************* PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 392 aa Download sequence |
MSHEIRSDKR FKKMMKLAGG DVKELLIKCA EALSENKIDK FELLIEEARG VVSISGEPIQ 60 RLGAYMLEGL VARQESSGTN IYSALRCREP ESKELLSYMR ILYDICPYLK FGYMAANGAI 120 ADALKNENRI HIIDFQIAQG TQWITLIQAL AVRPGGPPHV RITGIDDPTS EYARGDGLQL 180 VGKMLSDMSK KFNIPLEFKG LPVYGPEITR EMLEIRPGEA LAVNFTLQLH HTPDEGVDVN 240 NPRDGLLRMV KGLSPRVTTL VEQESNTNTT SFLTRFVETF DYYSAMLESI DATLTRDSKE 300 RINVEQHCLA KDIVNIIACE GKDRVERHEL LGKWRSRLSM AGFKPYPLSS YVNSVIKTLL 360 GYYSDKYTLV EKDGAMLLGW KNRNLISASA WH |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G48150.1 | 0.0 | GRAS family protein | ||||




